Gene Expression Data
Assay Details
Assay
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Reference:
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J:43772
Pattyn A, et al., Expression and interactions of the two closely related homeobox genes Phox2a and Phox2b during neurogenesis. Development. 1997 Oct;124(20):4065-75
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:5463984
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Gene symbol:
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Phox2b
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Gene name:
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paired-like homeobox 2b
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Probe:
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Phox2b probe1
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Results
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Specimen
2A:
embryonic day 9.0
(more )
Specimen
2A:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 9.0
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Sex:
|
Not Specified
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Type:
|
whole mount
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Fixation:
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4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: future hindbrain |
Present |
Regionally restricted |
2A
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Expression in two ventral columns on either side of the floor plate from an abrupt rostral limit just anterior to the rhombomere1/rhombomere2 (r1/r2) boundary into the cervical spinal cord,
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TS14: future spinal cord |
Present |
Regionally restricted |
2A
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Expression in two ventral columns on either side of the floor plate from an abrupt rostral limit just anterior to the rhombomere1/rhombomere2 (r1/r2) boundary into the cervical spinal cord,
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TS14: rhombomere 2 |
Strong |
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2A
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Expression is broader and more intense in rhombomeres 2 and 4.
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TS14: rhombomere 4 |
Strong |
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2A
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Expression is broader and more intense in rhombomeres 2 and 4.
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Specimen
2B:
embryonic day 10.5
(more )
Specimen
2B:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 10.5
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Sex:
|
Not Specified
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Type:
|
whole mount
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Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: rhombomere 1 |
Present |
Regionally restricted |
2B
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Expression in a groups of cells in the dorsolateral aspect of r1 corresponding to the forming locus coeruleus.
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TS17: rhombomere 2 |
Present |
Regionally restricted |
2B
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Lateral stripe, sharply limited rostrally at r1/r2 boundary and caudally at r6/r7 boundary. Ventral column with r2-and r4-specific thickenings. Dorsal stripe of scattered cells from sharp limit at r3/r4 boundary into cervical spinal cord.
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TS17: rhombomere 3 |
Present |
Regionally restricted |
2B
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Lateral stripe, sharply limited rostrally at r1/r2 boundary and caudally at r6/r7 boundary. Ventral column with r2-and r4-specific thickenings. Dorsal stripe of scattered cells from sharp limit at r3/r4 boundary into cervical spinal cord.
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TS17: rhombomere 4 |
Present |
Regionally restricted |
2B
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Lateral stripe, sharply limited rostrally at r1/r2 boundary and caudally at r6/r7 boundary. Ventral column with r2-and r4-specific thickenings. Dorsal stripe of scattered cells from sharp limit at r3/r4 boundary into cervical spinal cord.
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TS17: rhombomere 5 |
Present |
Regionally restricted |
2B
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Lateral stripe, sharply limited rostrally at r1/r2 boundary and caudally at r6/r7 boundary. Ventral column with r2-and r4-specific thickenings. Dorsal stripe of scattered cells from sharp limit at r3/r4 boundary into cervical spinal cord.
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TS17: rhombomere 6 |
Present |
Regionally restricted |
2B
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Lateral stripe, sharply limited rostrally at r1/r2 boundary and caudally at r6/r7 boundary. Ventral column with r2-and r4-specific thickenings. Dorsal stripe of scattered cells from sharp limit at r3/r4 boundary into cervical spinal cord.
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TS17: hindbrain |
Present |
Regionally restricted |
2B
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Expression in two ventral patches on both sides of the met-mesencephalic border, corresponding to the oculomotor (III) and trochlear (IV) motor nuclei.
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Specimen
2C:
embryonic day 11.5
(more )
Specimen
2C:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
|
whole mount
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Fixation:
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4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: hindbrain |
Present |
Regionally restricted |
2C
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Expression in cells at the rostral tips of the lateral columns. No expression in the ventral columns except in rhombomeres 4 and 5.
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Specimen
2D:
embryonic day 11.5
(more )
Specimen
2D:
(close )
Genetic Background:
|
Not Specified
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Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
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Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: hindbrain |
Present |
Regionally restricted |
2D
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Expression in two ventral patches on both sides of the met-mesencephalic border.Expression in scattered cells outside of the columns, organized in ventrodorsal strings.
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Specimen
4:
embryonic day 10.5
(more )
Specimen
4:
(close )
Genetic Background:
|
Not Specified
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Age:
|
embryonic day 10.5
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Sex:
|
Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
5B:
embryonic day 9.0
(more )
Specimen
5B:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
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Type:
|
whole mount
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Fixation:
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4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: future midbrain |
Absent |
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5B
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No expression in the forming oculomotor (III) and trochlear (IV) nuclei.
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Specimen
8A:
embryonic day 10.5
(more )
Specimen
8A:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
8B:
(close )
Genetic Background:
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involves: 129P2/OlaHsd
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Mutant Allele(s):
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Phox2atm1Jbr/Phox2atm1Jbr
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
8E:
embryonic day 10.5
(more )
Specimen
8E:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 10.5
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Sex:
|
Not Specified
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Type:
|
whole mount
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Fixation:
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4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: hindbrain |
Present |
Regionally restricted |
8E
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Expression in the met-mesencephalic domain in the anlagen of the oculomotor (III) and trochlear (IV) nuclei and locus coeruleus.
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TS17: midbrain |
Present |
Regionally restricted |
8E
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Expression in the met-mesencephalic domain in the anlagen of the oculomotor (III) and trochlear (IV) nuclei and locus coeruleus.
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Specimen
8F:
(close )
Genetic Background:
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involves: 129P2/OlaHsd
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Mutant Allele(s):
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Phox2atm1Jbr/Phox2atm1Jbr
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Age:
|
embryonic day 10.5
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Sex:
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Not Specified
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Type:
|
whole mount
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Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: hindbrain |
Absent |
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8F
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No expression in the anlagen of the oculomotor (III) and trochlear (IV) nuclei or locus coeruleus.
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TS17: midbrain |
Absent |
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8F
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No expression in the anlagen of the oculomotor (III) and trochlear (IV) nuclei or locus coeruleus.
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Specimen
not shown:
embryonic day 13.5
(more )
Specimen
not shown:
(close )
Genetic Background:
|
Not Specified
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Age:
|
embryonic day 13.5
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Sex:
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Not Specified
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Type:
|
whole mount
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Fixation:
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4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: midbrain |
Present |
Regionally restricted |
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Expression in a stream of cells across the midline connecting the left and right oculomotor nuclei.
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