Gene Expression Data
Assay Details
Assay
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Reference:
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J:48587
ten Berge D, et al., Mouse Alx3: an aristaless-like homeobox gene expressed during embryogenesis in ectomesenchyme and lateral plate mesoderm. Dev Biol. 1998 Jul 1;199(1):11-25
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:5476682
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Gene symbol:
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Alx3
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Gene name:
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aristaless-like homeobox 3
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Probe:
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Alx3 cDNA1
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Probe preparation:
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Antisense RNA
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Visualized with:
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Autoradiography
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Results
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Specimen
5A:
embryonic day 12.5
(more )
Note: transverse section
Specimen
5A:
(close )
Genetic Background:
|
involves: C57BL/6 * CBA
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
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Embedding:
|
Paraffin
|
Note:
|
transverse section
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: head mesenchyme |
Present |
Regionally restricted |
5A
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Expression is present in a thin layer of mesenchymal cells surrounding the telencephalic vesicles; expression in the remaining mesoderm of the cranial vault is generally low but above background.
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Specimen
5B:
embryonic day 10.5
(more )
Note: transverse section
Specimen
5B:
(close )
Genetic Background:
|
involves: C57BL/6 * CBA
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Note:
|
transverse section
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: head |
Present |
Regionally restricted |
5B
|
Expression is present in craniofacial structures; it is particularly high in the lower frontal part of the head, with a rostral border near the level of the eye.
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TS17: head mesenchyme |
Weak |
Regionally restricted |
5B
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Expression is present mesoderm of the cranial vault.
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TS17: 1st branchial arch |
Present |
Regionally restricted |
5B
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Expression is located distally.
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TS17: 2nd branchial arch |
Present |
Regionally restricted |
5B
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Expression is located distally.
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Specimen
5C:
embryonic day 12.5
(more )
Note: sagittal section
Specimen
5C:
(close )
Genetic Background:
|
involves: C57BL/6 * CBA
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Note:
|
sagittal section
|
Specimen
5D:
embryonic day 14.5
(more )
Note: transverse section
Specimen
5D:
(close )
Genetic Background:
|
involves: C57BL/6 * CBA
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Note:
|
transverse section
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: head |
Present |
Regionally restricted |
5D
|
Expression is present in craniofacial structures; it is particularly high in the lower frontal part of the head, with a rostral border near the level of the eye.
|
TS22: head mesenchyme |
Present |
Regionally restricted |
5D
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Expression is present in a thin layer of mesenchymal cells surrounding the telencephalic vesicles; expression in the remaining mesoderm of the cranial vault is generally low but above background.
|
TS22: nasal mesenchyme |
Strong |
Regionally restricted |
5D
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Expression is present in the mesenchyme around the nasal cavity; there is a lack of expression at more lateral positions.
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TS22: nasal septum mesenchyme |
Strong |
|
5D
|
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Specimen
5E:
embryonic day 14.5
(more )
Note: sagittal section
Specimen
5E:
(close )
Genetic Background:
|
involves: C57BL/6 * CBA
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Note:
|
sagittal section
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: nasal mesenchyme |
Present |
|
5E
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Expression is present in the neural-crest derived mesenchyme in the nasal process.
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TS22: lower jaw mesenchyme |
Present |
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5E
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Expression is present in the neural-crest derived mesenchyme of the developing jaws.
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TS22: upper jaw mesenchyme |
Present |
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5E
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Expression is present in the neural-crest derived mesenchyme of the developing jaws.
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TS22: premaxilla |
Present |
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5E
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Expression is present in the premaxilla but absent from the secondary plate.
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TS22: lower jaw |
Strong |
Regionally restricted |
5E
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Expression is high in the area surrounding Meckel's cartilage and elevated near the developing incisor and molar buds. It is not present in ossifying areas.
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TS22: Meckel's cartilage |
Absent |
|
5E
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Specimen
5F:
embryonic day 14.5
(more )
Note: transverse section
Specimen
5F:
(close )
Genetic Background:
|
involves: C57BL/6 * CBA
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Note:
|
transverse section
|
Specimen
5G:
embryonic day 12.5
(more )
Note: sagittal section
Specimen
5G:
(close )
Genetic Background:
|
involves: C57BL/6 * CBA
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Note:
|
sagittal section
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Structure |
Level |
Pattern |
Image |
Note |
TS20: chondrocranium |
Present |
Regionally restricted |
5G
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Expression is present in the neural-crest derived basisphenoid and absent in the mesoderm-derived basioccipital.
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Specimen
6A:
embryonic day 14.5
(more )
Note: cross section
Specimen
6A:
(close )
Genetic Background:
|
involves: C57BL/6 * CBA
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
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Type:
|
section
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Embedding:
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Paraffin
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Note:
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cross section
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Specimen
6B:
embryonic day 10.5
(more )
Note: cross section at the level of the liver near the diaphragm
Specimen
6B:
(close )
Genetic Background:
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involves: C57BL/6 * CBA
|
Age:
|
embryonic day 10.5
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Sex:
|
Not Specified
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Type:
|
section
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Embedding:
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Paraffin
|
Note:
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cross section at the level of the liver near the diaphragm
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Specimen
6C:
embryonic day 12.5
(more )
Note: cross section at the level of the umbilical hernia
Specimen
6C:
(close )
Genetic Background:
|
involves: C57BL/6 * CBA
|
Age:
|
embryonic day 12.5
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Sex:
|
Not Specified
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Type:
|
section
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Embedding:
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Paraffin
|
Note:
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cross section at the level of the umbilical hernia
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Structure |
Level |
Pattern |
Image |
Note |
TS20: tail |
Present |
Regionally restricted |
6C
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Expression in the tail is ventrally concentrated; this expression appears to extend to the ectoderm.
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TS20: tail mesenchyme |
Present |
|
6C
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TS20: body wall mesenchyme |
Present |
|
6C
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The body wall is still open at this site, which is reflected by an interruption of the expression domain.
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Specimen
6D:
embryonic day 12.5
(more )
Note: sagittal section
Specimen
6D:
(close )
Genetic Background:
|
involves: C57BL/6 * CBA
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Note:
|
sagittal section
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: genital tubercle |
Present |
Regionally restricted |
6D
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Expression is present in the genital eminence surrounds the urogenital sinuses.
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TS20: tail |
Present |
Regionally restricted |
6D
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Expression in the tail is ventrally concentrated; this expression appears to extend to the ectoderm.
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TS20: tail mesenchyme |
Present |
|
6D
|
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Specimen
6E:
embryonic day 14.5
(more )
Note: cross section
Specimen
6E:
(close )
Genetic Background:
|
involves: C57BL/6 * CBA
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Note:
|
cross section
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: genital tubercle |
Present |
Regionally restricted |
6E
|
Expression is present in the genital eminence surrounds the urogenital sinuses.
|
TS22: tail mesenchyme |
Present |
Regionally restricted |
6E
|
Expression in the tail is ventrally concentrated.
|
Specimen
6F:
embryonic day 13.5
(more )
Note: sagittal section
Specimen
6F:
(close )
Genetic Background:
|
involves: C57BL/6 * CBA
|
Age:
|
embryonic day 13.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Note:
|
sagittal section
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: genital tubercle |
Present |
Regionally restricted |
6F
|
Expression is present in the genital eminence surrounds the urogenital sinuses.
|
TS21: tail mesenchyme |
Present |
Regionally restricted |
6F
|
Expression in the tail is ventrally concentrated.
|
Specimen
6G:
embryonic day 11.5
(more )
Note: sagittal section
Specimen
6G:
(close )
Genetic Background:
|
involves: C57BL/6 * CBA
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Note:
|
sagittal section
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: intraembryonic coelom |
Present |
Regionally restricted |
6G
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Expression is present in the progenitor of the pleuroperitoneal membrane.
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TS19: trunk mesenchyme |
Weak |
Regionally restricted |
6G
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There is expression surrounding the mesonephric duct.
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Specimen
not shown:
embryonic day 10.5
(more )
Specimen
not shown:
(close )
Genetic Background:
|
involves: C57BL/6 * CBA
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
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Type:
|
section
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Embedding:
|
Paraffin
|
Specimen
not shown:
embryonic day 11.5
(more )
Specimen
not shown:
(close )
Genetic Background:
|
involves: C57BL/6 * CBA
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Specimen
7A/B:
embryonic day 14.5
(more )
Specimen
7A/B:
(close )
Genetic Background:
|
involves: C57BL/6 * CBA
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
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Embedding:
|
Paraffin
|
Specimen
8E:
embryonic day 10.5
(more )
Specimen
8E:
(close )
Genetic Background:
|
involves: C57BL/6 * CBA
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Specimen
8G:
embryonic day 10.5
(more )
Specimen
8G:
(close )
Genetic Background:
|
involves: C57BL/6 * CBA
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
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Paraffin
|
Specimen
8I:
embryonic day 13.5
(more )
Specimen
8I:
(close )
Genetic Background:
|
involves: C57BL/6 * CBA
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Age:
|
embryonic day 13.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
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