Gene Expression Data
Assay Details
Assay
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Reference:
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J:36483
Flenniken AM, et al., Distinct and overlapping expression patterns of ligands for Eph-related receptor tyrosine kinases during mouse embryogenesis. Dev Biol. 1996 Nov 1;179(2):382-401
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:5490998
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Gene symbol:
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Efnb1
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Gene name:
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ephrin B1
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Probe:
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Elk-L cDNA
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Visualized with:
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Alkaline phosphatase
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Results
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Specimen
5A:
embryonic day 7.5
(more )
Note: 2-3 somites.
Specimen
5A:
(close )
Genetic Background:
|
Not Specified
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Age:
|
embryonic day 7.5
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Sex:
|
Not Specified
|
Type:
|
whole mount
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Fixation:
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4% Paraformaldehyde
|
Note:
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2-3 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS11: future brain |
Present |
Regionally restricted |
5A
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A broad domain of expression was seen in the presumptive hind- and midbrain.
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Specimen
5B:
embryonic day 8.0
(more )
Note: 4-5 somites. flat mount
Specimen
5B:
(close )
Genetic Background:
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Not Specified
|
Age:
|
embryonic day 8.0
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Sex:
|
Not Specified
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Type:
|
whole mount
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Fixation:
|
4% Paraformaldehyde
|
Note:
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4-5 somites. flat mount
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Specimen
5C:
embryonic day 8.5
(more )
Note: 7 somites.
Specimen
5C:
(close )
Genetic Background:
|
Not Specified
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Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
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Type:
|
whole mount
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Fixation:
|
4% Paraformaldehyde
|
Note:
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7 somites.
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Specimen
5D:
embryonic day 8.5
(more )
Note: 7 to 8 somites. flat mount
Specimen
5D:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
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Fixation:
|
4% Paraformaldehyde
|
Note:
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7 to 8 somites. flat mount
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Specimen
5E:
embryonic day 9.0
(more )
Note: 12 somites.
Specimen
5E:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 9.0
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Sex:
|
Not Specified
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Type:
|
whole mount
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Fixation:
|
4% Paraformaldehyde
|
Note:
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12 somites.
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Specimen
5F:
embryonic day 9.5-10.0
(more )
Specimen
5F:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 9.5-10.0
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Sex:
|
Not Specified
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Type:
|
whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
7A:
embryonic day 10.0
(more )
Specimen
7A:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 10.0
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Sex:
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Not Specified
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Type:
|
whole mount
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Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS16: forelimb bud |
Present |
Regionally restricted |
7A
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Expression is in the distal posterior region.
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Specimen
7B:
embryonic day 10.5
(more )
Specimen
7B:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 10.5
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Sex:
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Not Specified
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Type:
|
whole mount
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Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: forelimb bud |
Strong |
Regionally restricted |
7B
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Expression is stronger in the posterior region.
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Specimen
7C:
embryonic day 11.0
(more )
Specimen
7C:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 11.0
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Sex:
|
Not Specified
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Type:
|
whole mount
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Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS18: forelimb bud |
Present |
Regionally restricted |
7C
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Expression is at the distal edge and in an arc orthogonal to the proximal-distal axis that was broad at the anterior edge and narrowed towards the center of the limb and in a central region.
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Specimen
7D:
embryonic day 11.5
(more )
Specimen
7D:
(close )
Genetic Background:
|
Not Specified
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Age:
|
embryonic day 11.5
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Sex:
|
Not Specified
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Type:
|
whole mount
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Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: footplate |
Present |
Regionally restricted |
7D
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Expression is in an arc of cells that spanned the anterior-posterior axis of the hand/footplate. (Authors did not specify hand or foot is shown)
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TS19: handplate |
Present |
Regionally restricted |
7D
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Expression is in an arc of cells that spanned the anterior-posterior axis of the hand/footplate. (Authors did not specify hand or foot is shown)
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Specimen
7E:
embryonic day 12.0-12.5
(more )
Specimen
7E:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 12.0-12.5
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Sex:
|
Not Specified
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Type:
|
whole mount
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Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: forelimb |
Present |
Regionally restricted |
7E
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Upregulation over the whole proximal forelimb with radiating rays. Expression is at the edge, less at the interdigital zone.
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TS20: hand |
Present |
Regionally restricted |
7E
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Upregulation over the whole proximal forelimb with radiating rays. Expression is at the edge, less at the interdigital zone.
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Specimen
7F:
embryonic day 12.0-12.5
(more )
Specimen
7F:
(close )
Genetic Background:
|
Not Specified
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Age:
|
embryonic day 12.0-12.5
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Sex:
|
Not Specified
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Type:
|
whole mount
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Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: foot |
Present |
Regionally restricted |
7F
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Expression is in two oval domains on the ventral side of the limb at the base of the paddle.
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TS20: forelimb |
Present |
Regionally restricted |
7F
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Expression is in two oval domains on the ventral side of the limb at the base of the paddle.
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TS20: hand |
Present |
Regionally restricted |
7F
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Expression is in two oval domains on the ventral side of the limb at the base of the paddle.
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TS20: hindlimb |
Present |
Regionally restricted |
7F
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Expression is in two oval domains on the ventral side of the limb at the base of the paddle.
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Specimen
7G:
embryonic day 14.0
(more )
Specimen
7G:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 14.0
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Sex:
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Not Specified
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Type:
|
whole mount
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Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: foot |
Present |
Regionally restricted |
7G
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Over the entire foot/handplate and outlining the developing tendons. (Authors did not specify hand or foot is shown)
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TS22: hand |
Present |
Regionally restricted |
7G
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Over the entire foot/handplate and outlining the developing tendons. (Authors did not specify hand or foot is shown)
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TS22: limb digit |
Present |
Regionally restricted |
7G
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Expression is at the tips.
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Specimen
7H:
embryonic day 14.0
(more )
Specimen
7H:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 14.0
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Sex:
|
Not Specified
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Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: foot |
Present |
Regionally restricted |
7H
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Over the entire foot/handplate and outlining the developing tendons. (Authors did not specify hand or foot is shown)
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TS22: hand |
Present |
Regionally restricted |
7H
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Over the entire foot/handplate and outlining the developing tendons. (Authors did not specify hand or foot is shown)
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TS22: limb digit |
Present |
Regionally restricted |
7H
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Expression is at the tips.
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Specimen
not shown:
embryonic day 15.5
(more )
Specimen
not shown:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 15.5
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Sex:
|
Not Specified
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Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS23: limb digit |
Present |
Regionally restricted |
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Expression is at the tips.
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Specimen
9A:
embryonic day 13.0
(more )
Specimen
9A:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 13.0
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Sex:
|
Not Specified
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Type:
|
section
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Fixation:
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4% Paraformaldehyde
|
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