About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:190428 Escamez T, et al., Developmental dynamics of PAFAH1B subunits during mouse brain development. J Comp Neurol. 2012 Dec 1;520(17):3877-94
Assay type: RNA in situ
MGI Accession ID: MGI:5521520
Gene symbol: Pafah1b2
Gene name: platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
Probe: Alpha2 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 2E: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: brain Present Regionally restricted 2E Expression is on the ventricular side of the entire anterior neural tube.
TS19: cerebellum primordium Present 2E

Specimen 2F: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: brain Present Regionally restricted 2F Expression is on the ventricular side of the entire anterior neural tube.
TS19: diencephalon Present Uniform 2F

Specimen 2G: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: telencephalon Present 2G Expression is weaker in the superficial cortical regions.

Specimen 2H: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: telencephalon Present 2H Expression is weaker in the superficial cortical regions.

Specimen 3E: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cerebellum Strong Regionally restricted 3E Expression is at the pial surface.
TS22: cerebral cortex subventricular zone Weak 3E
TS22: cerebral cortex ventricular layer Weak 3E
TS22: thalamus Present Regionally restricted 3E Expression is in the caudal part.
TS22: cerebellum ventricular layer Present 3E
TS22: epithalamus Present 3E
TS22: inferior colliculus Present Regionally restricted 3E Expression is in the mantle of the inferior colliculus.
TS22: midbrain ventricular layer Present 3E
TS22: pretectum Absent 3E

Specimen 3F: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: telencephalon Present Uniform 3F Including the preoptic area.
TS22: hypothalamus Present Regionally restricted 3F Expression is in the infundibular and paraventricular region of the hypothalamus.
TS22: thalamus Present Regionally restricted 3F Expression is in the caudal part.
TS22: epithalamus Present 3F
TS22: pretectum Absent 3F

Specimen 3G: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cerebral cortex subventricular zone Weak Uniform 3G
TS22: cerebral cortex ventricular layer Weak Uniform 3G

Specimen 3H: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: telencephalon ventricular layer Present Uniform 3H

Specimen 4E: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: telencephalon Present Regionally restricted 4E Expression is in the preoptic area.
TS25: hypothalamus Present 4E

Specimen 4F: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: thalamus Strong 4F
TS25: midbrain lateral wall Present Regionally restricted 4F Expression is in the subventricular zone.
TS25: telencephalon Present Regionally restricted 4F Expression is in the preoptic area.
TS25: cerebellum Present 4F
TS25: hypothalamus Present 4F
TS25: oculomotor nerve Present 4F
TS25: diencephalon Weak Regionally restricted 4F Expression is in the prethalamus.

Specimen 4G: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: cerebral cortex intermediate zone Present 4G Uniform expression aside from strong expression as a thin layer at the marginal zone/cortical plate boundary and also at the cortical plate/intermediate zone boundary.
TS25: cerebral cortex marginal zone Present 4G Uniform expression aside from strong expression as a thin layer at the marginal zone/cortical plate boundary and also at the cortical plate/intermediate zone boundary.
TS25: cortical plate Present 4G Uniform expression aside from strong expression as a thin layer at the marginal zone/cortical plate boundary and also at the cortical plate/intermediate zone boundary.

Specimen 4H: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: cerebral cortex subventricular zone Present 4H
TS25: cerebral cortex ventricular zone Present 4H

Specimen 5J: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: cortical layer VI Strong 5J Expression is in a set of neurons localized in the deepest part of cortical layer 6.
TS28: main olfactory bulb Present 5J Expression is in the rostral migratory stream and in the different layers.
TS28: rostral migratory stream Present 5J Expression is in the rostral migratory stream and in the different layers.
TS28: claustrum Weak 5J
TS28: corpus striatum Weak 5J
TS28: main olfactory bulb glomerular layer Weak 5J
TS28: telencephalon septum Weak 5J

Specimen 5K: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Present 5K
TS28: cerebellum internal granule cell layer Present 5K

Specimen 5L: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Present 5L
TS28: cerebellum external granule cell layer Present 5L
TS28: cerebellum internal granule cell layer Present 5L
TS28: cerebellum molecular layer Present 5L
TS28: deep cerebellar nucleus Present 5L

Specimen 5M: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: cortical layer VI Strong Regionally restricted 5M Expression is in a set of neurons localized in the deepest part of cortical layer 6.

Specimen 5N: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: hippocampus Strong Uniform 5N

Specimen 5O: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Present 5O


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/18/2025
MGI 6.24
The Jackson Laboratory