Gene Expression Data
Assay Details
Assay
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Reference:
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J:134646
Boekhoorn K, et al., Doublecortin (DCX) and doublecortin-like (DCL) are differentially expressed in the early but not late stages of murine neocortical development. J Comp Neurol. 2008 Apr 1;507(4):1639-52
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Assay type:
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Immunohistochemistry
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MGI Accession ID:
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MGI:5521562
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Gene symbol:
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Dclk1
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Gene name:
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doublecortin-like kinase 1
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Antibody:
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anti-DCL
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Detection system:
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Biotinylated secondary antibody/[Strept]avidin coupled to horseradish peroxidase
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Assay notes:
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Fixative was methanol/acetone/water (40:40:20). Sections were post-fixed in Zamboni-mix (2% PFA/0.1% picric acid/0.025% glutaraldehyde/0.1M phosphate buffer, pH7.4).
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Results
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Specimen
1B:
embryonic day 9.0
(more )
Specimen
1B:
(close )
Genetic Background:
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CD-1
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Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
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Type:
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section
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Fixation:
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Other - See Notes
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Embedding:
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Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: prosencephalon |
Present |
Regionally restricted |
1B
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Expression is in the ventricular zone, the inner wall of the third ventricle, and neocortical neuroepithelium.
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TS14: future diencephalon |
Present |
Regionally restricted |
1B
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Expression is in dorsal and ventral diencephalon including the thalamus and hypothalamus.
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TS14: optic vesicle |
Weak |
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1B
|
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Specimen
1D:
embryonic day 9.0
(more )
Specimen
1D:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: prosencephalon |
Present |
Regionally restricted |
1D
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Expression is in the ventricular zone and preplate and in a radial fibers crossing the intermediate zone.
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Specimen
1E:
embryonic day 9.0
(more )
Specimen
1E:
(close )
Genetic Background:
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CD-1
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: prosencephalon |
Present |
Regionally restricted |
1E
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Expression is in mitotic cells in the ventricular zone.
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Specimen
1F:
embryonic day 9.0
(more )
Specimen
1F:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: prosencephalon |
Present |
Regionally restricted |
1F
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Expression is in mitotic cells in the ventricular zone.
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Specimen
1G:
embryonic day 9.0
(more )
Specimen
1G:
(close )
Genetic Background:
|
CD-1
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Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: prosencephalon |
Present |
|
1G
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Expression is in mitotic cells in the ventricular zone.
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Specimen
1I:
embryonic day 9.0
(more )
Specimen
1I:
(close )
Genetic Background:
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CD-1
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Age:
|
embryonic day 9.0
|
Sex:
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Not Specified
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Type:
|
section
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Embedding:
|
Paraffin
|
Specimen
2B:
embryonic day 10.0
(more )
Specimen
2B:
(close )
Genetic Background:
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CD-1
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Age:
|
embryonic day 10.0
|
Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS16: telencephalon |
Present |
Regionally restricted |
2B
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Expression is in the lateral and medial parts.
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Specimen
2E:
embryonic day 10.0
(more )
Specimen
2E:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
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section
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Embedding:
|
Paraffin
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Specimen
2F:
embryonic day 10.0
(more )
Specimen
2F:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
section
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Embedding:
|
Paraffin
|
Specimen
2G:
embryonic day 10.0
(more )
Specimen
2G:
(close )
Genetic Background:
|
CD-1
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Age:
|
embryonic day 10.0
|
Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Specimen
3A:
embryonic day 10.0
(more )
Specimen
3A:
(close )
Genetic Background:
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CD-1
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Age:
|
embryonic day 10.0
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Specimen
3B:
embryonic day 10.0
(more )
Specimen
3B:
(close )
Genetic Background:
|
CD-1
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Age:
|
embryonic day 10.0
|
Sex:
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Not Specified
|
Type:
|
section
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Embedding:
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Paraffin
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Specimen
3C:
embryonic day 10.0
(more )
Specimen
3C:
(close )
Genetic Background:
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CD-1
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Age:
|
embryonic day 10.0
|
Sex:
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Not Specified
|
Type:
|
section
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Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS16: diencephalon |
Present |
Single cells |
3C
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Expression is in an occasional mitotic cell in the intermediate zone.
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Specimen
3E:
embryonic day 10.0
(more )
Specimen
3E:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
section
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Embedding:
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Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS16: dorsal root ganglion |
Present |
Regionally restricted |
3E
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Expression is in fibers.
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TS16: future spinal cord |
Present |
Regionally restricted |
3E
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Expression is in the inner wall of the dorsal spinal cord and in fibers traversing towards the dorsal root ganglia.
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Specimen
4B:
embryonic day 11.0
(more )
Specimen
4B:
(close )
Genetic Background:
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CD-1
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Age:
|
embryonic day 11.0
|
Sex:
|
Not Specified
|
Type:
|
section
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Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS18: telencephalon |
Present |
Regionally restricted |
4B
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Expression is in the medial part of the lateral ventricle wall in pial-oriented radial fibers extending from the ventricular zone toward the marginal zone and in mitotic cells.
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Specimen
4C:
embryonic day 11.0
(more )
Specimen
4C:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 11.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS18: telencephalon |
Present |
Regionally restricted |
4C
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Expression is in the medial part of the lateral ventricle wall in pial-oriented radial fibers extending from the ventricular zone toward the marginal zone and in mitotic cells.
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Specimen
4D:
embryonic day 11.0
(more )
Specimen
4D:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 11.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS18: telencephalon |
Present |
Regionally restricted |
4D
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Expression is in the medial part of the lateral ventricle wall in pial-oriented radial fibers extending from the ventricular zone toward the marginal zone and in mitotic cells.
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Specimen
4F:
embryonic day 11.0
(more )
Specimen
4F:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 11.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS18: telencephalon |
Present |
Regionally restricted |
4F
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Expression is in the medial part of the lateral ventricle wall in pial-oriented radial fibers extending from the ventricular zone toward the marginal zone and in mitotic cells.
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Specimen
4H:
embryonic day 11.0
(more )
Specimen
4H:
(close )
Genetic Background:
|
CD-1
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Age:
|
embryonic day 11.0
|
Sex:
|
Not Specified
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Type:
|
section
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Embedding:
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Paraffin
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Specimen
4J:
embryonic day 11.0
(more )
Specimen
4J:
(close )
Genetic Background:
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CD-1
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Age:
|
embryonic day 11.0
|
Sex:
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Not Specified
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Type:
|
section
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Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS18: future spinal cord |
Present |
Regionally restricted |
4J
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In the caudal regions expression is in fibers, absent in cellular profiles and apoptotic cells.
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Specimen
4L,N:
embryonic day 11.0
(more )
Note: N is a higher magnification of L.
Specimen
4L,N:
(close )
Genetic Background:
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CD-1
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Age:
|
embryonic day 11.0
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Note:
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N is a higher magnification of L.
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Specimen
5B:
embryonic day 13.0
(more )
Specimen
5B:
(close )
Genetic Background:
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CD-1
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Age:
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embryonic day 13.0
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Specimen
5E:
embryonic day 13.0
(more )
Specimen
5E:
(close )
Genetic Background:
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CD-1
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Age:
|
embryonic day 13.0
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Specimen
5G:
embryonic day 13.0
(more )
Specimen
5G:
(close )
Genetic Background:
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CD-1
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Age:
|
embryonic day 13.0
|
Sex:
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Not Specified
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Type:
|
section
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Embedding:
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Paraffin
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Specimen
5H:
embryonic day 13.0
(more )
Specimen
5H:
(close )
Genetic Background:
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CD-1
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Age:
|
embryonic day 13.0
|
Sex:
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Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: olfactory epithelium |
Strong |
Regionally restricted |
5H
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Expression is in radial fibers oriented toward the outer layer.
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Specimen
5J:
embryonic day 13.0
(more )
Specimen
5J:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 13.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: midbrain |
Present |
Regionally restricted |
5J
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Expression is in both radially and tangentially orientated fibers.
|
TS21: pons |
Present |
Regionally restricted |
5J
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Expression is in both radially and tangentially orientated fibers.
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Specimen
5L:
embryonic day 13.0
(more )
Specimen
5L:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 13.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: optic stalk |
Present |
Regionally restricted |
5L
|
Expression is in fibers entering the optic vesicle through the eye stalk.
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Specimen
5L inset:
embryonic day 13.0
(more )
Specimen
5L inset:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 13.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
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Specimen
6B:
embryonic day 13.0
(more )
Specimen
6B:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 13.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: spinal cord |
Present |
|
6B
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Expression is in the lower part of the spinal cord in rostrocaudal fibers.
|
Specimen
6D:
embryonic day 13.0
(more )
Specimen
6D:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 13.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: spinal cord |
Present |
Regionally restricted |
6D
|
Expression is in the lower part of the spinal cord in rostrocaudal fibers.
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Specimen
7B:
embryonic day 15.0
(more )
Specimen
7B:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 15.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Specimen
7E:
embryonic day 17.0
(more )
Specimen
7E:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 17.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS25: tongue |
Strong |
Regionally restricted |
7E
|
Expression is in radially oriented fibers.
|
Specimen
7G:
embryonic day 17.0
(more )
Specimen
7G:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 17.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
Specimen
not shown:
embryonic day 15.0
(more )
Specimen
not shown:
(close )
Genetic Background:
|
CD-1
|
Age:
|
embryonic day 15.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Embedding:
|
Paraffin
|
|