About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:134646 Boekhoorn K, et al., Doublecortin (DCX) and doublecortin-like (DCL) are differentially expressed in the early but not late stages of murine neocortical development. J Comp Neurol. 2008 Apr 1;507(4):1639-52
Assay type: Immunohistochemistry
MGI Accession ID: MGI:5521562
Gene symbol: Dclk1
Gene name: doublecortin-like kinase 1
Antibody: anti-DCL
Detection system: Biotinylated secondary antibody/[Strept]avidin coupled to horseradish peroxidase
Assay notes: Fixative was methanol/acetone/water (40:40:20). Sections were post-fixed in Zamboni-mix (2% PFA/0.1% picric acid/0.025% glutaraldehyde/0.1M phosphate buffer, pH7.4).
Results
Specimen 1B: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: prosencephalon Present Regionally restricted 1B Expression is in the ventricular zone, the inner wall of the third ventricle, and neocortical neuroepithelium.
TS14: future diencephalon Present Regionally restricted 1B Expression is in dorsal and ventral diencephalon including the thalamus and hypothalamus.
TS14: optic vesicle Weak 1B

Specimen 1D: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: prosencephalon Present Regionally restricted 1D Expression is in the ventricular zone and preplate and in a radial fibers crossing the intermediate zone.

Specimen 1E: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: prosencephalon Present Regionally restricted 1E Expression is in mitotic cells in the ventricular zone.

Specimen 1F: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: prosencephalon Present Regionally restricted 1F Expression is in mitotic cells in the ventricular zone.

Specimen 1G: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: prosencephalon Present 1G Expression is in mitotic cells in the ventricular zone.

Specimen 1I: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: prosencephalon Present 1I

Specimen 2B: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: telencephalon Present Regionally restricted 2B Expression is in the lateral and medial parts.

Specimen 2E: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: telencephalon Present Regionally restricted 2E Expression is in the preplate and in radial fibers in the intermediate zone.
TS16: telencephalon ventricular layer Present 2E

Specimen 2F: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: telencephalon ventricular layer Present 2F
TS16: telencephalon Present Regionally restricted 2F Expression is in the preplate and in radial fibers in the intermediate zone.

Specimen 2G: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: telencephalon ventricular layer Present 2G
TS16: telencephalon Present Regionally restricted 2G Expression is in the preplate and in radial fibers in the intermediate zone.

Specimen 3A: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: diencephalon lateral wall ventricular layer Present Regionally restricted 3A Expression is mitotic cells in the dorsal diencephalon.
TS16: diencephalon Present Regionally restricted 3A Expression is in radial fibers traversing into the intermediate zone in the dorsal diencephalon.

Specimen 3B: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: diencephalon lateral wall ventricular layer Present Regionally restricted 3B Expression is mitotic cells in the dorsal diencephalon.
TS16: diencephalon Present Regionally restricted 3B Expression is in radial fibers traversing into the intermediate zone in the dorsal diencephalon.

Specimen 3C: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: diencephalon Present Single cells 3C Expression is in an occasional mitotic cell in the intermediate zone.

Specimen 3E: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: dorsal root ganglion Present Regionally restricted 3E Expression is in fibers.
TS16: future spinal cord Present Regionally restricted 3E Expression is in the inner wall of the dorsal spinal cord and in fibers traversing towards the dorsal root ganglia.

Specimen 4B: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: telencephalon Present Regionally restricted 4B Expression is in the medial part of the lateral ventricle wall in pial-oriented radial fibers extending from the ventricular zone toward the marginal zone and in mitotic cells.

Specimen 4C: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: telencephalon Present Regionally restricted 4C Expression is in the medial part of the lateral ventricle wall in pial-oriented radial fibers extending from the ventricular zone toward the marginal zone and in mitotic cells.

Specimen 4D: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: telencephalon Present Regionally restricted 4D Expression is in the medial part of the lateral ventricle wall in pial-oriented radial fibers extending from the ventricular zone toward the marginal zone and in mitotic cells.

Specimen 4F: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: telencephalon Present Regionally restricted 4F Expression is in the medial part of the lateral ventricle wall in pial-oriented radial fibers extending from the ventricular zone toward the marginal zone and in mitotic cells.

Specimen 4H: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: telencephalon Weak 4H Expression is in the frontolateral part.

Specimen 4J: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: future spinal cord Present Regionally restricted 4J In the caudal regions expression is in fibers, absent in cellular profiles and apoptotic cells.

Specimen 4L,N: embryonic day 11.0 (more )
Note: N is a higher magnification of L.
Structure Level Pattern Image Note
TS18: dorsal root ganglion Present 4L , 4N
TS18: future spinal cord Present Regionally restricted 4L , 4N Expression is in rostrocaudally orientated fibers.

Specimen 5B: embryonic day 13.0 (more )
Structure Level Pattern Image Note
TS21: cortical plate Present 5B
TS21: dorsal root ganglion Present 5B
TS21: hypothalamus Present 5B
TS21: pons Present 5B
TS21: thalamus Present 5B
TS21: telencephalon ventricular layer Weak 5B

Specimen 5E: embryonic day 13.0 (more )
Structure Level Pattern Image Note
TS21: cerebral cortex marginal layer Present 5E
TS21: cortical plate Present 5E
TS21: cerebral cortex ventricular layer Absent 5E

Specimen 5G: embryonic day 13.0 (more )
Structure Level Pattern Image Note
TS21: olfactory epithelium Present 5G

Specimen 5H: embryonic day 13.0 (more )
Structure Level Pattern Image Note
TS21: olfactory epithelium Strong Regionally restricted 5H Expression is in radial fibers oriented toward the outer layer.

Specimen 5J: embryonic day 13.0 (more )
Structure Level Pattern Image Note
TS21: midbrain Present Regionally restricted 5J Expression is in both radially and tangentially orientated fibers.
TS21: pons Present Regionally restricted 5J Expression is in both radially and tangentially orientated fibers.

Specimen 5L: embryonic day 13.0 (more )
Structure Level Pattern Image Note
TS21: optic stalk Present Regionally restricted 5L Expression is in fibers entering the optic vesicle through the eye stalk.

Specimen 5L inset: embryonic day 13.0 (more )
Structure Level Pattern Image Note
TS21: retina Present 5L inset Expression is at the base.

Specimen 6B: embryonic day 13.0 (more )
Structure Level Pattern Image Note
TS21: spinal cord Present 6B Expression is in the lower part of the spinal cord in rostrocaudal fibers.

Specimen 6D: embryonic day 13.0 (more )
Structure Level Pattern Image Note
TS21: spinal cord Present Regionally restricted 6D Expression is in the lower part of the spinal cord in rostrocaudal fibers.

Specimen 7B: embryonic day 15.0 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex Weak 7B

Specimen 7E: embryonic day 17.0 (more )
Structure Level Pattern Image Note
TS25: tongue Strong Regionally restricted 7E Expression is in radially oriented fibers.

Specimen 7G: embryonic day 17.0 (more )
Structure Level Pattern Image Note
TS25: cerebral cortex intermediate zone Weak 7G
TS25: cerebral cortex marginal zone Weak 7G
TS25: cerebral cortex ventricular zone Absent 7G

Specimen not shown: embryonic day 15.0 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Absent


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
06/12/2024
MGI 6.13
The Jackson Laboratory