About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:154364 Beaubien F, et al., Differential expression of slitrk family members in the mouse nervous system. Dev Dyn. 2009 Nov 18;238(12):3285-3296
Assay type: RNA in situ
MGI Accession ID: MGI:5578586
Gene symbol: Slitrk3
Gene name: SLIT and NTRK-like family, member 3
Probe: MGC clone 90025
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1C: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: brain Present Widespread 1C
TS26: trigeminal ganglion Present 1C
TS26: hippocampus Strong 1C
Specimen 2C: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: main olfactory bulb Present Regionally restricted 2C Expressed in the granule cell layer and in the mitral cell layer.
Specimen 2I: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb granule cell layer Present 2I
TS28: main olfactory bulb mitral cell layer Present 2I
Specimen 3E: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cortical plate Weak Regionally restricted 3E Expressed only in a single layer.
TS26: cerebral cortex ventricular zone Absent 3E
Specimen 3F: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: cortical layer II Present 3F
TS28: cortical layer III Present 3F
TS28: cortical layer IV Present 3F
TS28: cortical layer V Present 3F
TS28: cortical layer VI Present 3F
Specimen 4C: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: dentate gyrus Strong 4C
TS26: hippocampus CA1 Strong 4C
TS26: hippocampus CA3 Strong 4C
Specimen 4I: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: dentate gyrus Strong 4I
TS28: hippocampus CA1 Strong 4I
TS28: hippocampus CA3 Strong 4I
Specimen 6C: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: inferior colliculus Strong 6C
TS26: superior colliculus Strong 6C
TS26: cerebellum Purkinje cell layer Present 6C
TS26: cerebellum Present Regionally restricted 6C Expressed in the molecular layer, the medial cerebellar nucleus, and the lateral cerebellar nucleus.
Specimen 7C: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Weak 7C
TS28: deep cerebellar nucleus Weak 7C
TS28: cerebellum internal granule cell layer Absent 7C
Specimen 8C: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: spinal cord Present Regionally restricted 8C Expressed in the gray matter.
TS26: dorsal root ganglion Present Regionally restricted 8C Expressed in a subset of sensory neuron nuclei.
Specimen 9C: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: trigeminal ganglion Strong Regionally restricted 9C Expressed in subsets of cell bodies.
Specimen 10C: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: neural retina Present Regionally restricted 10C Expressed in the prospective inner nuclear layer, and low expression in the retinal ganglion cell layer.
TS26: retina inner nuclear layer Present 10C
Specimen not shown: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: vomeronasal organ Absent
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory