About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:180986 Wei Q, et al., A focused in situ hybridization screen identifies candidate transcriptional regulators of thymic epithelial cell development and function. PLoS One. 2011;6(11):e26795
Assay type: RNA in situ
MGI Accession ID: MGI:5660654
Gene symbol: Sox2
Gene name: SRY (sex determining region Y)-box 2
Probe: Sox2 probe6
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 1F: embryonic day 9.5 (more )
Note: 20-23 somites
Structure Level Pattern Image Note
TS15: 1st branchial pouch Present 1F
TS15: 2nd branchial pouch Present 1F
TS15: 3rd branchial pouch endoderm Absent 1F
Specimen 1L: embryonic day 10.5 (more )
Note: 30-33 somites
Structure Level Pattern Image Note
TS17: 1st branchial pouch endoderm Present Widespread 1L
TS17: 2nd branchial pouch endoderm Present Widespread 1L
TS17: 4th branchial pouch endoderm Present Widespread 1L
TS17: 3rd branchial pouch dorsal endoderm Present Widespread 1L The expressing domain is proximal and posterior.
TS17: 3rd branchial pouch ventral endoderm Absent 1L
Specimen 2F: embryonic day 10.5 (more )
Note: 30-33 somites
Structure Level Pattern Image Note
TS17: 3rd branchial pouch dorsal endoderm Present 2F
TS17: 3rd branchial pouch ventral endoderm Absent 2F
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
06/12/2024
MGI 6.13 		The Jackson Laboratory