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Gene Expression Data
Assay Details
Assay
Reference: J:71423 Houweling AC, et al., Gene and cluster-specific expression of the Iroquois family members during mouse development. Mech Dev. 2001 Sep;107(1-2):169-74
Assay type: RNA in situ
MGI Accession ID: MGI:5661530
Gene symbol: Irx6
Gene name: Iroquois homeobox 6
Probe: Irx6 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 1B: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: endocardial lining Weak 1B Irx6
TS20: skin Present 1B Irx6
TS20: hindbrain Present Regionally restricted 1B Irx6
TS20: spinal cord Present Regionally restricted 1B Irx6

Specimen 2F: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: cranial nerve Present Regionally restricted 2F Expression is present in spots where cranial nerves III and IV will develop.
TS19: midbrain floor plate Present Regionally restricted 2F Expression is present in spots where cranial nerves III and IV will develop.
TS19: metencephalon basal plate Present Regionally restricted 2F Expression is present in the motor part of the pons, where the motor nuclei of the 7th cranial nerve will develop.

Specimen 2L: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: neural tube lateral wall Present Regionally restricted 2L Expression is present in motor neurons.

Specimen 2R: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: inner ear Absent 2R No expression is seen in the otic vesicle.
TS19: acoustic ganglion Present 2R Expression is present in the complex.
TS19: facial ganglion Present 2R Expression is present in the complex.

Specimen 3M: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: lower jaw molar Absent 3M
TS21: upper jaw molar Absent 3M

Specimen limb--9.5: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: limb Weak

Specimen limb--10.5: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: limb mesenchyme Weak

Specimen limb--11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: limb mesenchyme Weak

Specimen limb--12.5: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: limb mesenchyme Present Regionally restricted Expression is present in the proximal limb.

Specimen limb--13.5: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: forelimb interdigital region mesenchyme Present
TS21: hindlimb interdigital region mesenchyme Present

Specimen limb--14.5: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: forelimb interdigital region mesenchyme Present
TS22: hindlimb interdigital region mesenchyme Present

Specimen not shown: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: endocardial lining Present
TS17: lung Absent

Specimen not shown: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: pancreas primordium Absent
TS19: gonad Absent
TS19: trachea Absent There is no expression in the larygo-tracheal groove.
TS19: metencephalon basal plate Present Regionally restricted Expression is present in the pons.
TS19: acoustic ganglion Present Expression is present in the complex.
TS19: facial ganglion Present Expression is present in the complex.

Specimen not shown: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: spinal cord lateral wall Present Regionally restricted Expression is present in motor neurons.
TS21: spinal cord ventricular layer Weak
TS21: neural retinal epithelium Present Regionally restricted Expression is present in the marginal zone of the neural retina.
TS21: mammary gland primordium Present
TS21: vibrissa follicle Absent
TS21: epidermis Weak Regionally restricted Expression is found in the limb and thorax.
TS21: dermis Absent
TS21: gonad Absent
TS21: alimentary system epithelium Absent There is no expression in the endoderm of the gastro-intestinal tract.
TS21: endocardial tissue Present Regionally restricted There is expression in the atrial and ventricular endodcardium, but not in the endocardium of the cushions.
TS21: atrium endocardial lining Present
TS21: ventricle endocardial lining Present


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
06/12/2024
MGI 6.13
The Jackson Laboratory