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Gene Expression Data
Assay Details
Assay
Reference: J:132390 Alexandrovich A, et al., A role for GATA-6 in vertebrate chondrogenesis. Dev Biol. 2008 Feb 15;314(2):457-70
Assay type: RNA in situ
MGI Accession ID: MGI:6189543
Gene symbol: Gata6
Gene name: GATA binding protein 6
Probe: Gata6 probe4
Probe preparation: labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: duodenum epithelium Present 1A
TS20: umbilical vein Present 1A
TS20: Meckel's cartilage Present Regionally restricted 1A Expression in walls of Meckel's cartilage
TS20: chondrocranium bone Present Regionally restricted 1A Expression throughout basio-occipital bone.
TS20: cervical vertebral cartilage condensation Present Widespread 1A Expression in prevertebra of cervical, thoracic, lumbar, sacral and caudal regions.
TS20: lumbar vertebral cartilage condensation Present Widespread 1A Expression in prevertebra of cervical, thoracic, lumbar, sacral and caudal regions.
TS20: sacral vertebral cartilage condensation Present Widespread 1A Expression in prevertebra of cervical, thoracic, lumbar, sacral and caudal regions.
TS20: sacral vertebral pre-cartilage condensation Present Widespread 1A Expression in prevertebra of cervical, thoracic, lumbar, sacral and caudal regions.
TS20: tail vertebral pre-cartilage condensation Present Widespread 1A Expression in prevertebra of cervical, thoracic, lumbar, sacral and caudal regions.
TS20: thoracic vertebral cartilage condensation Present Widespread 1A Expression in prevertebra of cervical, thoracic, lumbar, sacral and caudal regions.

Specimen 1B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: endocardial cushion Strong 1B
TS20: cardiac muscle tissue Present Single cells 1B Expression in isolated, individual cells within the myocardium.

Specimen 1C: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: thoracic vertebral cartilage condensation Present Regionally restricted 1C Expression in prevertebra of thoracic vertebral column. In more rostral prevertebra, weaker expression in more mature centres or prevertebra which will give rise to transverse processes. No expression in center of neural arch condensations.
TS20: dorsal root ganglion Absent 1C

Specimen 1D: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: sacral vertebral cartilage condensation Present Regionally restricted 1D Expression in sacral/caudal vertebral column. Uniform expression throughout centra of prevertebra.
TS20: tail vertebral pre-cartilage condensation Present Regionally restricted 1D Expression in sacral/caudal vertebral column. Uniform expression throughout centra of prevertebra.
TS20: spinal cord Absent 1D

Specimen 1E: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: thoracic vertebral cartilage condensation Present Regionally restricted 1E Expression domain in thoracic vertebral column broadly overlaps with Uncx. Uniform expression in centra of prevertebra. Expression extends into pedicle.
TS20: rib pre-cartilage condensation Present Regionally restricted 1E Expression extends into head of rib.

Specimen 1G: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cervical vertebral cartilage condensation Present Regionally restricted 1G Authors report expression in superior vertebral column.
TS20: chondrocranium bone Present Regionally restricted 1G Expression in dorsal region of basio-occipital bone.
TS20: C1 vertebral cartilage condensation Present Regionally restricted 1G Expression in (C1) atlas and (C2) axis prevertebra. Expression in sclerotomal cells from fifth somite contributing to both prevertebra.
TS20: C2 vertebral cartilage condensation Present Regionally restricted 1G Expression in (C1) atlas and (C2) axis prevertebra. Expression in sclerotomal cells from fifth somite contributing to both prevertebra.

Specimen 1I: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: femur Present Regionally restricted 1I Expression largely associated with proliferating chondrocyte precursors flanking central region of hypertrophic chondrocytes. No expresssion in central region of hypertrophic chondrocytes.

Specimen 5D: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: radius-ulna pre-cartilage condensation Present Regionally restricted 5D Expression in cartilage primordia of the radius.
TS20: humerus pre-cartilage condensation Present Regionally restricted 5D Expression extends into head of rib.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
06/12/2024
MGI 6.13
The Jackson Laboratory