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Gene Expression Data
Assay Details
Assay
Reference: J:198109 Oeschger FM, et al., Gene expression analysis of the embryonic subplate. Cereb Cortex. 2012 Jun;22(6):1343-59
Assay type: RNA in situ
MGI Accession ID: MGI:6258666
Gene symbol: Cdh18
Gene name: cadherin 18
Probe: Cdh18 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 2c: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cortical subplate Strong Non-Uniform 2c The labeled band appeared to be thicker in the anterior than in the posterior subplate.
TS23: cortical plate Absent 2c

Specimen 3d wild-type: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cortical subplate Present 3d Wild-type

Specimen 3d Reeler: embryonic day 15.5; Relnrl-Orl/Relnrl-Orl (more )
Structure Level Pattern Image Note
TS23: cerebral cortex Present Regionally restricted 3d Reeler Expression was shifted to the superplate in a broad band just below the cortical pial surface of the reeler mutant.

Specimen 4b E13.5: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: cerebral cortex Absent 4b E13.5

Specimen 4b E14.5: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cortical subplate Present 4b E14.5

Specimen 4b E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cortical subplate Present 4b E15.5

Specimen 4b E17.5: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: cortical subplate Present 4b E17.5
TS25: cortical plate Present Regionally restricted 4b E17.5 Expression ws detected in the upper cortical plate.

Specimen 4b P8: postnatal day 8 (more )
Structure Level Pattern Image Note
TS28: cortical subplate Strong 4b P8
TS28: cortical layer V Weak 4b P8
TS28: cortical layer VI Weak 4b P8

Specimen 4b Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cortical subplate Strong 4b Adult
TS28: cortical layer V Weak 4b Adult
TS28: cortical layer VI Weak 4b Adult

Specimen S4m: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cortical subplate Present S4m
TS23: prethalamus Present S4m
TS23: thalamus Present S4m

Specimen S4m': postnatal day 8 (more )
Structure Level Pattern Image Note
TS28: claustrum Present S4m'
TS28: cortical subplate Present S4m'
TS28: hippocampus Present S4m'
TS28: thalamus Present S4m'

Specimen not shown: embryonic day 14.5 (more )
Note: Table S5
Structure Level Pattern Image Note
TS22: hypothalamus Present
TS22: piriform cortex Present
TS22: prethalamus Present
TS22: telencephalon septum Present
TS22: olfactory cortex Present Regionally restricted Expression was detected in olfactory tubercle.

Specimen not shown: embryonic day 15.5 (more )
Note: Table S5
Structure Level Pattern Image Note
TS23: amygdala Present
TS23: globus pallidus Present
TS23: hypothalamus Present
TS23: prethalamus Present
TS23: basal ganglia Present Regionally restricted Expression was detected in claustrum.

Specimen not shown: embryonic day 17.5 (more )
Note: Table S5
Structure Level Pattern Image Note
TS25: globus pallidus Present
TS25: prethalamus Present
TS25: basal ganglia Present Regionally restricted Expression was detected in claustrum.

Specimen not shown: postnatal day 8 (more )
Note: Table S5
Structure Level Pattern Image Note
TS28: claustrum Present
TS28: brainstem nucleus Present Regionally restricted Expression was detected in the interstitial nucleus of the medial longitudinal fasciculus.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
10/09/2024
MGI 6.24
The Jackson Laboratory