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Gene Expression Data
Assay Details
Assay
Reference: J:307862 Wilkerson BA, et al., Novel cell types and developmental lineages revealed by single-cell RNA-seq analysis of the mouse crista ampullaris. Elife. 2021 May 18;10:e60108
Assay type: RNA in situ
MGI Accession ID: MGI:6828848
Gene symbol: Col9a3
Gene name: collagen, type IX, alpha 3
Probe: Col9a3_riboprobe
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 4 S1: embryonic day 15.5 (more )
Note: This specimen was generated by the Allen Developing Mouse Brain Atlas project - RP_090724_01_G04 - sagittal.
Structure Level Pattern Image Note
TS23: semicircular canal epithelium Present Regionally restricted 4 S1_Col9a3 Expression is seen in nonsensory ampulla epithelium.
Specimen 5 S1: embryonic day 15.5 (more )
Note: This specimen was generated by the Allen Developing Mouse Brain Atlas project - RP_090724_01_G04 - sagittal.
Structure Level Pattern Image Note
TS23: vestibular component mesenchyme Present Regionally restricted 5 S1_Col9a3 Expression is seen in the dense mesenchyme associated with the ampulla epithelium; it is not seen in the loose mesenchyme nor the dense mesenchyme near the boney otic capsule.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory