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Gene Expression Data
Assay Details
Assay
Reference: J:312419 Haddad-Tovolli R, et al., Mouse thalamic differentiation: gli-dependent pattern and gli-independent prepattern. Front Neurosci. 2012;6:27
Assay type: RNA in situ
MGI Accession ID: MGI:7284820
Gene symbol: Cdh6
Gene name: cadherin 6
Probe: Cdh6 probe7
Probe preparation: Antisense RNA
Results
Specimen 3M: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: thalamic nucleus Present Regionally restricted 3M Expressed in the anterior thalamic nuclei.
Specimen 3N: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: lateral geniculate nucleus Present 3N
TS26: ventral posterior thalamic group Present 3N
TS26: intralaminar thalamic group Present Regionally restricted 3N Expressed in centrolateral nucleus.
TS26: thalamic nucleus Present Regionally restricted 3N Expressed in the dorsal pronucleus (lateral and posterior thalamic nuclei).
Specimen 3O: embryonic day 18.5; Gli3Xt/Gli3Xt (more )
Structure Level Pattern Image Note
TS26: thalamic nucleus Present Regionally restricted 3O Reduced intensity of expression in the anterior thalamic nuclei (summarized in Table1).
Specimen 3P: embryonic day 18.5; Gli3Xt/Gli3Xt (more )
Structure Level Pattern Image Note
TS26: lateral geniculate nucleus Present 3P Reduced intensity of expression (summarized in Table1).
TS26: ventral posterior thalamic group Present 3P Reduced intensity of expression (summarized in Table1).
TS26: intralaminar thalamic group Present Regionally restricted 3P Reduced intensity of expression in centrolateral nucleus (summarized in Table1).
TS26: thalamic nucleus Present Regionally restricted 3P No expression in the appropriate position for dorsal pronucleus.
Specimen 3Q: embryonic day 18.5; Gli2tm1Alj/Gli2tm1Alj (more )
Structure Level Pattern Image Note
TS26: thalamic nucleus Present Regionally restricted 3Q Reduced intensity of expression in the anterior thalamic nuclei (summarized in Table1).
Specimen 3R: embryonic day 18.5; Gli2tm1Alj/Gli2tm1Alj (more )
Structure Level Pattern Image Note
TS26: ventral posterior thalamic group Present 3R Very reduced intensity of expression (summarized in Table1).
TS26: lateral geniculate nucleus Absent 3R Summarized in Table1.
TS26: thalamic nucleus Present Regionally restricted 3R Only expressed in the lateral dorsal pronucleus.
Specimen 5Q: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: thalamic nucleus Present Regionally restricted 5Q Expressed in the anterior thalamic nuclei.
Specimen 5R: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: lateral geniculate nucleus Present 5R
TS26: ventral posterior medial thalamic nucleus Present 5R
TS26: intralaminar thalamic group Present Regionally restricted 5R Expressed in centrolateral nucleus.
TS26: thalamic nucleus Present Regionally restricted 5R Expressed in the dorsal pronucleus (lateral and posterior thalamic nuclei).
Specimen 5S: embryonic day 18.5; Foxb1tm1(cre)Gabo/Foxb1+, Shhtm2Amc/Shhtm2Amc, Gli3Xt/Gli3Xt (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS26: thalamic nucleus Weak Regionally restricted 5S Expressed as two dorsal stripes.
Specimen 5T: embryonic day 18.5; Foxb1tm1(cre)Gabo/Foxb1+, Shhtm2Amc/Shhtm2Amc, Gli3Xt/Gli3Xt (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS26: thalamic nucleus Weak Regionally restricted 5T Expressed as two dorsal stripes.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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06/12/2024
MGI 6.13 		The Jackson Laboratory