Gene Expression Data
Assay Details
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Assay
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Reference:
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J:178972
Cajal M, et al., Clonal and molecular analysis of the prospective anterior neural boundary in the mouse embryo. Development. 2012 Jan;139(2):423-36
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:7491707
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Gene symbol:
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Six3
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Gene name:
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sine oculis-related homeobox 3
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Probe:
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Six3 cDNA2
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Probe preparation:
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Antisense RNA
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Results
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Specimen
4D1 lateral:
embryonic day 7.0
(more  )
Note: late streak/late gastrulation stage
Specimen
4D1 lateral:
(close  )
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Genetic Background:
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(C57BL/6J x CBA)F1
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Age:
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embryonic day 7.0
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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late streak/late gastrulation stage
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| Structure |
Level |
Pattern |
Image |
Note |
| TS10: neural ectoderm |
Present |
Regionally restricted |
4D1
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Expressed in the prospective forebrain, started at a very distal position (just rostral to the node) compared with Hesx1 expression at the same stage.
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| TS10: embryo mesoderm |
Present |
Regionally restricted |
4D1
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Expressed in the axial mesoderm.
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Specimen
4D1 frontal:
embryonic day 7.0
(more )
Note: late streak/late gastrulation stage
Specimen
4D1 frontal:
(close )
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Genetic Background:
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(C57BL/6J x CBA)F1
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Age:
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embryonic day 7.0
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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late streak/late gastrulation stage
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| Structure |
Level |
Pattern |
Image |
Note |
| TS10: neural ectoderm |
Present |
Regionally restricted |
4D2
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Expressed in the prospective forebrain, started at a very distal position (just rostral to the node) compared with Hesx1 expression at the same stage.
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| TS10: embryo mesoderm |
Present |
Regionally restricted |
4D2
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Expressed in the axial mesoderm.
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Specimen
4D2 lateral:
embryonic day 7.5
(more )
Note: neural plate stage
Specimen
4D2 lateral:
(close )
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Genetic Background:
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(C57BL/6J x CBA)F1
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Age:
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embryonic day 7.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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neural plate stage
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| Structure |
Level |
Pattern |
Image |
Note |
| TS11: future brain |
Present |
Regionally restricted |
4D3
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Expressed in the prospective forebrain. Expression spread rostrally and slightly laterally.
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Specimen
4D2 frontal:
embryonic day 7.5
(more )
Note: neural plate stage
Specimen
4D2 frontal:
(close )
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Genetic Background:
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(C57BL/6J x CBA)F1
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Age:
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embryonic day 7.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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neural plate stage
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| Structure |
Level |
Pattern |
Image |
Note |
| TS11: future brain |
Present |
Regionally restricted |
4D4
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Expressed in the prospective forebrain. Expression spread rostrally and slightly laterally.
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Specimen
4D3 lateral:
embryonic day 7.5
(more )
Note: headfold stage
Specimen
4D3 lateral:
(close )
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Genetic Background:
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(C57BL/6J x CBA)F1
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Age:
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embryonic day 7.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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headfold stage
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| Structure |
Level |
Pattern |
Image |
Note |
| TS11: future brain |
Present |
Regionally restricted |
4D5
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Expressed in the prospective forebrain, colocalised with Hesx1 expression.
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Specimen
4D3 frontal:
embryonic day 7.5
(more )
Note: headfold stage
Specimen
4D3 frontal:
(close )
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Genetic Background:
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(C57BL/6J x CBA)F1
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Age:
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embryonic day 7.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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headfold stage
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| Structure |
Level |
Pattern |
Image |
Note |
| TS11: future brain |
Present |
Regionally restricted |
4D6
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Expressed in the prospective forebrain, colocalised with Hesx1 expression.
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Specimen
4D4 lateral:
embryonic day 7.5
(more )
Note: late headfold stage
Specimen
4D4 lateral:
(close )
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Genetic Background:
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(C57BL/6J x CBA)F1
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Age:
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embryonic day 7.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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late headfold stage
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| Structure |
Level |
Pattern |
Image |
Note |
| TS11: future brain |
Present |
Regionally restricted |
4D7
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Expressed in the prospective forebrain, colocalised with Hesx1 expression.
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Specimen
4D4 frontal:
embryonic day 7.5
(more )
Note: late headfold stage
Specimen
4D4 frontal:
(close )
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Genetic Background:
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(C57BL/6J x CBA)F1
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Age:
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embryonic day 7.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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late headfold stage
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| Structure |
Level |
Pattern |
Image |
Note |
| TS11: future brain |
Present |
Regionally restricted |
4D8
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Expressed in the prospective forebrain, colocalised with Hesx1 expression.
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Specimen
9A:
embryonic day 8.0
(more )
Note: 5- to 7-somite stage
Specimen
9A:
(close )
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Genetic Background:
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(C57BL/6J x CBA)F1
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Age:
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embryonic day 8.0
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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5- to 7-somite stage
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Specimen
9B:
embryonic day 8.0
(more )
Note: 5- to 7-somite stage
Specimen
9B:
(close )
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Genetic Background:
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(C57BL/6J x CBA)F1
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Age:
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embryonic day 8.0
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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section from whole mount
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Embedding:
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Cryosection
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Note:
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5- to 7-somite stage
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Specimen
9B':
embryonic day 8.0
(more )
Note: 5- to 7-somite stage
Specimen
9B':
(close )
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Genetic Background:
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(C57BL/6J x CBA)F1
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Age:
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embryonic day 8.0
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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section from whole mount
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Embedding:
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Cryosection
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Note:
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5- to 7-somite stage
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Specimen
9C:
embryonic day 8.0
(more )
Note: 5- to 7-somite stage
Specimen
9C:
(close )
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Genetic Background:
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(C57BL/6J x CBA)F1
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Age:
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embryonic day 8.0
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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section from whole mount
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Embedding:
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Cryosection
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Note:
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5- to 7-somite stage
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Specimen
9C':
embryonic day 8.0
(more )
Note: 5- to 7-somite stage
Specimen
9C':
(close )
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Genetic Background:
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(C57BL/6J x CBA)F1
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Age:
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embryonic day 8.0
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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section from whole mount
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Embedding:
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Cryosection
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Note:
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5- to 7-somite stage
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Analysis Tools