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Gene Expression Data
Assay Details
Assay
Reference: J:186285 Lefkovics K, et al., Comparative analysis of type II classic cadherin mRNA distribution patterns in the developing and adult mouse somatosensory cortex and hippocampus suggests significant functional redundancy. J Comp Neurol. 2012 May 1;520(7):1387-1405
Assay type: RNA in situ
MGI Accession ID: MGI:7492294
Gene symbol: Cdh11
Gene name: cadherin 11
Probe: pSP73-11
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 4P: embryonic day 14.0 (more )
Structure Cell Type Level Pattern Image Note
TS22: hippocampus GABAergic interneuron Present Regionally restricted 4P Expressed in the ammonic neuroepithelium/preplate. Summarized in Table 3.
Specimen 4Q: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: hippocampus Present Regionally restricted 4Q Expressed in the hippocampal plate and the subplate. Summarized in Table 3.
Specimen 4R: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: hippocampus pyramidal cell layer Present 4R Expressed at the same level in CA1 and CA3.
TS27: CA1 pyramidal cell layer Present 4R Summarized in Table 3.
TS27: dentate gyrus granule cell layer Present 4R Summarized in Table 3.
TS27: dentate gyrus hilus Present 4R Summarized in Table 3.
TS27: hippocampus CA3 Present 4R Summarized in Table 3.
TS27: hippocampus molecular layer Present 4R Summarized in Table 3.
TS27: hippocampus stratum lacunosum Present 4R Summarized in Table 3.
TS27: hippocampus stratum lucidum Present 4R Summarized in Table 3.
TS27: hippocampus stratum oriens Present 4R Summarized in Table 3.
TS27: hippocampus stratum radiatum Present 4R Summarized in Table 3.
Specimen 6F1: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: hippocampus stratum oriens Present Single cells 6F1 Expressed only in a few cells.
TS28: CA1 pyramidal cell layer Strong 6F1
TS28: hippocampus stratum radiatum Present 6F1
Specimen 6F2: postnatal adult (more )
Structure Level Pattern Image Note
TS28: hippocampus stratum oriens Present Single cells 6F2 Expressed only in a few cells.
TS28: CA1 pyramidal cell layer Strong 6F2
TS28: hippocampus stratum radiatum Present 6F2
Specimen 6F3: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: CA3 pyramidal cell layer Strong 6F3
TS28: hippocampus stratum lucidum Present 6F3
Specimen 6F4: postnatal adult (more )
Structure Level Pattern Image Note
TS28: CA3 pyramidal cell layer Strong 6F4
TS28: hippocampus stratum lucidum Present 6F4
Specimen 6F5: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Strong 6F5
TS28: dentate gyrus hilus Present 6F5
Specimen 6F6: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Strong 6F6
TS28: dentate gyrus hilus Present 6F6
Specimen 8F: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: hippocampus stratum radiatum Present 8F
Specimen 9F1: embryonic day 14.0 (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS22: cerebral cortex intermediate zone Absent 9F1
TS22: cerebral cortex subventricular zone Absent 9F1
TS22: cerebral cortex ventricular layer Absent 9F1
TS22: cortical subplate Absent 9F1
TS22: cerebral cortex marginal layer Present 9F1
TS22: cortical plate Present 9F1
Specimen 9F2: embryonic day 16.0 (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS24: cerebral cortex intermediate zone Absent 9F2
TS24: cerebral cortex subventricular zone Absent 9F2
TS24: cerebral cortex ventricular layer Absent 9F2
TS24: cortical subplate Absent 9F2
TS24: cerebral cortex marginal layer Present 9F2
TS24: cortical plate Present 9F2
Specimen 9F3: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: cerebral cortex ventricular layer Absent 9F3
Specimen 9F4: postnatal day 1 (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS27: cerebral cortex intermediate zone Absent 9F4
TS27: cortical layer I Present 9F4
TS27: cortical layer II Present 9F4
TS27: cortical layer III Present 9F4
TS27: cortical layer IV Present 9F4
TS27: cortical layer V Present 9F4
TS27: cortical layer VI Present 9F4
TS27: cortical subplate Present 9F4
Specimen 9F5: postnatal day 10 (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS28: cortical layer I Present 9F5
TS28: cortical layer II Present 9F5
TS28: cortical layer III Present 9F5
TS28: cortical layer IV Present 9F5
TS28: cortical layer V Present 9F5
TS28: cortical layer VI Present 9F5
TS28: cortical subplate Present 9F5
TS28: cerebral hemisphere white matter Absent 9F5
Specimen 9F6: postnatal adult (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS28: cortical layer II Present 9F6
TS28: cortical layer III Present 9F6
TS28: cortical layer IV Present 9F6
TS28: cortical layer V Present 9F6
TS28: cortical layer VI Present 9F6
TS28: cortical subplate Present 9F6
TS28: cerebral hemisphere white matter Absent 9F6
TS28: cortical layer I Present 9F6 fairly low levels
Specimen not shown: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: chondrocranium bone Very strong Expressed in the cartilaginous tissue of the skull.
TS20: brain Present Much weaker but distinct neural expression compared with that of the skull.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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12/10/2024
MGI 6.24 		The Jackson Laboratory