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Gene Expression Data
Assay Details
Assay
Reference: J:63172 Erskine L, et al., Retinal ganglion cell axon guidance in the mouse optic chiasm: expression and function of robos and slits. J Neurosci. 2000 Jul 1;20(13):4975-82
Assay type: RNA in situ
MGI Accession ID: MGI:7565490
Gene symbol: Slit2
Gene name: slit guidance ligand 2
Probe: Slit2 cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 2E: embryonic day 12.5 (more )
Note: vibratome section
Structure Level Pattern Image Note
TS20: retina Absent 2E

Specimen 2J: embryonic day 14.5 (more )
Note: vibratome section
Structure Cell Type Level Pattern Image Note
TS22: retina retinal ganglion cell Present Regionally restricted 2J Expressed throughout retinal ganglion cell layer. Expressed by most cells in the layer.

Specimen 2O/R: embryonic day 17.5 (more )
Note: vibratome section
Structure Level Pattern Image Note
TS25: retina layer Present Regionally restricted 2R , 2O Expressed at the inner nuclear layer.

Specimen 3Q: embryonic day 12.5 (more )
Note: vibratome section
Structure Level Pattern Image Note
TS20: diencephalon Strong Regionally restricted 3Q Expressed at the ventral midline in the region in which the axons enter the brain and turn to grow ventrally, including the position of the glial knot, a glial structure at the midline of the diencephalon that has been proposed to delimit the pathway of the ingrowing axons.

Specimen 3R: embryonic day 12.5 (more )
Note: vibratome section
Structure Level Pattern Image Note
TS20: diencephalon Strong Regionally restricted 3R Expressed at the ventral midline in the region in which the axons enter the brain and turn to grow ventrally.

Specimen 3S: embryonic day 12.5 (more )
Note: vibratome section
Structure Level Pattern Image Note
TS20: diencephalon Strong Regionally restricted 3S Expressed at the ventral midline in the region in which the axons enter the brain and turn to grow ventrally (see 3Q and 3R).

Specimen 3T: embryonic day 12.5 (more )
Note: vibratome section
Structure Level Pattern Image Note
TS20: diencephalon Strong Regionally restricted 3T Expressed at the ventral midline in the region in which the axons enter the brain and turn to grow ventrally (see 3Q and 3R).

Specimen 4Q: embryonic day 14.5 (more )
Note: vibratome section
Structure Level Pattern Image Note
TS22: diencephalon Present Regionally restricted 4Q Expression was maintained at the ventral midline, in a region directly dorsal to the site of axon divergence.

Specimen 4R: embryonic day 14.5 (more )
Note: vibratome section
Structure Level Pattern Image Note
TS22: diencephalon Present Regionally restricted 4R Expression was maintained at the ventral midline, in a region directly dorsal to the site of axon divergence.

Specimen 4S: embryonic day 14.5 (more )
Note: vibratome section
Structure Level Pattern Image Note
TS22: diencephalon Present Regionally restricted 4S Expression was maintained at the ventral midline, in a region directly dorsal to the site of axon divergence. No expression at the more ventral level at which the axons cross the midline.

Specimen 4T: embryonic day 14.5 (more )
Note: vibratome section
Structure Level Pattern Image Note
TS22: diencephalon Present Regionally restricted 4T Expression was maintained at the ventral midline, in a region directly dorsal to the site of axon divergence. No expression at the more ventral level at which the axons cross the midline.

Specimen 4W: embryonic day 14.5 (more )
Note: vibratome section
Structure Level Pattern Image Note
TS22: diencephalon Present Regionally restricted 4W Expression was maintained at the ventral midline, in a region directly dorsal to the site of axon divergence. Expressed by a subset of the midline radial glial cells (compared with 4V).

Specimen 5E: embryonic day 17.5 (more )
Note: vibratome section
Structure Level Pattern Image Note
TS25: diencephalon Present Regionally restricted 5E Expression was maintained at the ventral midline, in a region directly dorsal to the site of axon divergence. No expression at the more ventral level at which the axons cross the midline.

Specimen not shown: embryonic day 15.5 (more )
Note: vibratome section
Structure Cell Type Level Pattern Image Note
TS23: retina layer retinal ganglion cell Present Regionally restricted Expressed throughout retinal ganglion cell layer.
TS23: diencephalon Present Regionally restricted Expression was maintained at the ventral midline, in a region directly dorsal to the site of axon divergence. No expression at the more ventral level at which the axons cross the midline.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
06/12/2024
MGI 6.13
The Jackson Laboratory