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Gene Expression Data
Assay Details
Assay
Reference: J:309045 Garcia-Guillen IM, et al., Netrin-1/DCC Signaling Differentially Regulates the Migration of Pax7, Nkx6.1, Irx2, Otp, and Otx2 Cell Populations in the Developing Interpeduncular Nucleus. Front Cell Dev Biol. 2020;8:588851
Assay type: RNA in situ
MGI Accession ID: MGI:7581069
Gene symbol: Ntn1
Gene name: netrin 1
Probe: netrin 1 cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1D: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: midbrain-hindbrain junction Strong Regionally restricted 1D Expressed in the floor plate in the isthmus.
TS23: hindbrain floor plate Strong Regionally restricted 1D Expressed in the floor plate in rhombomere 1.
Specimen 1E: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: hindbrain floor plate Present Regionally restricted 1E Expressed in the floor plate in rhombomere 1. Also expressed by some neuron populations within the basal mantle.
TS26: midbrain-hindbrain junction Present Regionally restricted 1E Expressed in the floor plate in the isthmus. Also expressed by some neuron populations within the basal mantle.
TS26: interpeduncular nucleus Absent 1E
TS26: hindbrain ventricular layer Strong 1E
Specimen not shown: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: hindbrain floor plate Strong Regionally restricted Intensely expressed in the ventricular layer, including that of isthmus and rhombomere 1.
TS19: hindbrain ventricular layer Strong Regionally restricted Intensely expressed in the ventricular layer, including that of isthmus and rhombomere 1.
TS19: midbrain-hindbrain junction Strong Regionally restricted Intensely expressed in the ventricular layer.
Specimen not shown: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: hindbrain floor plate Strong Regionally restricted Intensely expressed in the ventricular layer, including that of isthmus and rhombomere 1.
TS21: hindbrain ventricular layer Strong Regionally restricted Intensely expressed in the ventricular layer, including that of isthmus and rhombomere 1.
TS21: midbrain-hindbrain junction Strong Regionally restricted Intensely expressed in the ventricular layer.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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10/09/2024
MGI 6.24 		The Jackson Laboratory