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Gene Expression Data
Assay Details
Assay
Reference: J:330213 Ebeid M, et al., PRDM16 expression and function in mammalian cochlear development. Dev Dyn. 2022 Oct;251(10):1666-1683
Assay type: Immunohistochemistry
MGI Accession ID: MGI:7581995
Gene symbol: Myo6
Gene name: myosin VI
Antibody: anti-Myo6
Results
Specimen 2C Prdm16cGT/+ Base: postnatal day 0; Prdm16Gt(OST67423)Lex/Prdm16+ (more )
Note: Triple labeled: green - Myo6; red - Sox2 (assay MGI:7581990); white - Tubb3 (assay MGI:7587712).
Structure Cell Type Level Pattern Image Note
TS27: cochlear duct cochlea auditory hair cell Present Regionally restricted 2C Prdm16cGT/+ Base Expression was detected in hair cells in the base of the cochlear duct.

Specimen 2C Prdm16cGT/cGT Base: postnatal day 0; Prdm16Gt(OST67423)Lex/Prdm16Gt(OST67423)Lex (more )
Note: Triple labeled: green - Myo6; red - Sox2 (assay MGI:7581990); white - Tubb3 (assay MGI:7587712).
Structure Cell Type Level Pattern Image Note
TS27: cochlear duct cochlea auditory hair cell Present Regionally restricted 2C Prdm16cGT/cGT Base Expression was detected in hair cells in the base of the cochlear duct.

Specimen 2C Prdm16cGT/+ Middle: postnatal day 0; Prdm16Gt(OST67423)Lex/Prdm16+ (more )
Note: Triple labeled: green - Myo6; red - Sox2 (assay MGI:7581990); white - Tubb3 (assay MGI:7587712).
Structure Cell Type Level Pattern Image Note
TS27: cochlear duct cochlea auditory hair cell Present Regionally restricted 2C Prdm16cGT/+ Middle Expression was detected in hair cells in the middle of the cochlear duct.

Specimen 2C Prdm16cGT/cGT Middle: postnatal day 0; Prdm16Gt(OST67423)Lex/Prdm16Gt(OST67423)Lex (more )
Note: Triple labeled: green - Myo6; red - Sox2 (assay MGI:7581990); white - Tubb3 (assay MGI:7587712).
Structure Cell Type Level Pattern Image Note
TS27: cochlear duct cochlea auditory hair cell Present Regionally restricted 2C Prdm16cGT/cGT Middle Expression was detected in hair cells in the middle of the cochlear duct.

Specimen 2C Prdm16cGT/+ Apex: postnatal day 0; Prdm16Gt(OST67423)Lex/Prdm16+ (more )
Note: Triple labeled: green - Myo6; red - Sox2 (assay MGI:7581990); white - Tubb3 (assay MGI:7587712).
Structure Cell Type Level Pattern Image Note
TS27: cochlear duct cochlea auditory hair cell Present Regionally restricted 2C Prdm16cGT/+ Apex Expression was detected in hair cells in the apex of the cochlear duct.

Specimen 2C Prdm16cGT/cGT Apex: postnatal day 0; Prdm16Gt(OST67423)Lex/Prdm16Gt(OST67423)Lex (more )
Note: Triple labeled: green - Myo6; red - Sox2 (assay MGI:7581990); white - Tubb3 (assay MGI:7587712).
Structure Cell Type Level Pattern Image Note
TS27: cochlear duct cochlea auditory hair cell Present Regionally restricted 2C Prdm16cGT/cGT Apex Expression was detected in hair cells in the apex of the cochlear duct. Staining showed a higher density of hair cells in the apical turn of Prdm16<cGT> null cochlea.

Specimen 3A Prdm16cGT/+: postnatal day 0; Prdm16Gt(OST67423)Lex/Prdm16+ (more )
Structure Cell Type Level Pattern Image Note
TS27: cochlear duct epithelium cochlear inner hair cell Present 3A Prdm16cGT/+
TS27: cochlear duct epithelium cochlear outer hair cell Present 3A Prdm16cGT/+

Specimen 3A Prdm16cGT/cGT: postnatal day 0; Prdm16Gt(OST67423)Lex/Prdm16Gt(OST67423)Lex (more )
Structure Cell Type Level Pattern Image Note
TS27: cochlear duct epithelium cochlear inner hair cell Present 3A Prdm16cGT/cGT
TS27: cochlear duct epithelium cochlear outer hair cell Present 3A Prdm16cGT/cGT

Specimen 3A Prdm16cGT/+ Base: postnatal day 0; Prdm16Gt(OST67423)Lex/Prdm16+ (more )
Note: Double labeled: red - Myo6; green - Phalloidin.
Structure Cell Type Level Pattern Image Note
TS27: cochlear duct epithelium cochlear inner hair cell Present Regionally restricted 3A Prdm16cGT/+ Base Expression was detected in hair cells in the base of the cochlear duct.
TS27: cochlear duct epithelium cochlear outer hair cell Present Regionally restricted 3A Prdm16cGT/+ Base Expression was detected in hair cells in the base of the cochlear duct.

Specimen 3A Prdm16cGT/cGT Base: postnatal day 0; Prdm16Gt(OST67423)Lex/Prdm16Gt(OST67423)Lex (more )
Note: Double labeled: red - Myo6; green - Phalloidin.
Structure Cell Type Level Pattern Image Note
TS27: cochlear duct epithelium cochlear inner hair cell Present Regionally restricted 3A Prdm16cGT/cGT Base Expression was detected in supporting cells in the base of the cochlear duct with no change in density relative to control.
TS27: cochlear duct epithelium cochlear outer hair cell Present Regionally restricted 3A Prdm16cGT/cGT Base Expression was detected in supporting cells in the base of the cochlear duct with no change in density relative to control.

Specimen 3A Prdm16cGT/+ Middle: postnatal day 0; Prdm16Gt(OST67423)Lex/Prdm16+ (more )
Note: Double labeled: red - Myo6; green - Phalloidin.
Structure Cell Type Level Pattern Image Note
TS27: cochlear duct epithelium cochlear inner hair cell Present Regionally restricted 3A Prdm16cGT/+ Middle Expression was detected in hair cells in the middle of the cochlear duct.
TS27: cochlear duct epithelium cochlear outer hair cell Present Regionally restricted 3A Prdm16cGT/+ Middle Expression was detected in hair cells in the middle of the cochlear duct.

Specimen 3A Prdm16cGT/cGT Middle: postnatal day 0; Prdm16Gt(OST67423)Lex/Prdm16Gt(OST67423)Lex (more )
Note: Double labeled: red - Myo6; green - Phalloidin.
Structure Cell Type Level Pattern Image Note
TS27: cochlear duct epithelium cochlear inner hair cell Present Regionally restricted 3A Prdm16cGT/cGT Middle Expression was detected in supporting cells in the middle of the cochlear duct with no change in density relative to control.
TS27: cochlear duct epithelium cochlear outer hair cell Present Regionally restricted 3A Prdm16cGT/cGT Middle Expression was detected in supporting cells in the middle of the cochlear duct with no change in density relative to control.

Specimen 3A Prdm16cGT/+ Apex: postnatal day 0; Prdm16Gt(OST67423)Lex/Prdm16+ (more )
Note: Double labeled: red - Myo6; green - Phalloidin.
Structure Cell Type Level Pattern Image Note
TS27: cochlear duct epithelium cochlear inner hair cell Present Regionally restricted 3A Prdm16cGT/+ Apex Expression was detected in hair cells in the apex of the cochlear duct.
TS27: cochlear duct epithelium cochlear outer hair cell Present Regionally restricted 3A Prdm16cGT/+ Apex Expression was detected in hair cells in the apex of the cochlear duct.

Specimen 3A Prdm16cGT/cGT Apex: postnatal day 0; Prdm16Gt(OST67423)Lex/Prdm16Gt(OST67423)Lex (more )
Note: Double labeled: red - Myo6; green - Phalloidin.
Structure Cell Type Level Pattern Image Note
TS27: cochlear duct epithelium cochlear inner hair cell Present Regionally restricted 3A Prdm16cGT/cGT Apex Expression was detected in inner hair cells in the apex of the cochlear duct with a density around 150% relative to control.
TS27: cochlear duct epithelium cochlear outer hair cell Present Regionally restricted 3A Prdm16cGT/cGT Apex Expression was detected in outer hair cells in the apex of the cochlear duct with a density around 140% relative to control.

Specimen 4A Prdm16cGT/+: postnatal day 0; Prdm16Gt(OST67423)Lex/Prdm16+ (more )
Note: Triple labeled: red - Myo6; white - Tubb3 (assay MGI:7587712); green - Phalloidin.
Structure Cell Type Level Pattern Image Note
TS27: cochlear duct epithelium cochlear inner hair cell Present 4A Prdm16cGT/+ Base Myo6 , 4A Prdm16cGT/+ Base Merge , 4A Prdm16cGT/+
TS27: cochlear duct epithelium cochlear outer hair cell Present 4A Prdm16cGT/+ Base Myo6 , 4A Prdm16cGT/+ Base Merge , 4A Prdm16cGT/+

Specimen 4A Prdm16cGT/cGT: postnatal day 0; Prdm16Gt(OST67423)Lex/Prdm16Gt(OST67423)Lex (more )
Note: Triple labeled: red - Myo6; white - Tubb3 (assay MGI:7587712); green - Phalloidin.
Structure Cell Type Level Pattern Image Note
TS27: cochlear duct epithelium cochlear inner hair cell Present 4A Prdm16cGT/cGT , 4A Prdm16cGT/cGT Base Merge , 4A Prdm16cGT/cGT Base Myo6
TS27: cochlear duct epithelium cochlear outer hair cell Present 4A Prdm16cGT/cGT , 4A Prdm16cGT/cGT Base Merge , 4A Prdm16cGT/cGT Base Myo6
TS27: greater epithelial ridge cochlea auditory hair cell Present Single cells 4A Prdm16cGT/cGT Base Merge , 4A Prdm16cGT/cGT Base Myo6 , 4A Prdm16cGT/cGT Middle Merge , 4A Prdm16cGT/cGT Middle Myo6 Ectopic hair cells were detected in the Kolliker's organ. The number of ectopic HCs in the whole cochlea ranged from 6 to 32 cells/cochlea, and they occurred either in clusters of 4 to 5 cells or as individual cells. Tubb3 immunostaining revealed that the ectopic cells were innervated with nerve fibers running through the Kolliker's organ.


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory