Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ABCD3
  • Mouse genes Abcd3
  • Rat genes Abcd3
  • Zfish genes abcd3a,abcd3b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Abcd3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0047617	acyl-CoA hydrolase activity	ABCD3	IDA		Human	PMID:29397936
Molecular Function	GO:0005524	ATP binding	ABCD3	IDA		Human	PMID:11248239
Molecular Function	GO:0005524	ATP binding	Abcd3	IDA		Rat	PMID:12176987|RGD:1598654
Molecular Function	GO:0016887	ATP hydrolysis activity	ABCD3	IDA		Human	PMID:11248239
Molecular Function	GO:0016887	ATP hydrolysis activity	ABCD3	IDA		Human	PMID:29397936
Molecular Function	GO:0042626	ATPase-coupled transmembrane transporter activity	ABCD3	IDA		Human	PMID:29397936
Molecular Function	GO:0005324	long-chain fatty acid transporter activity	ABCD3	IMP		Human	PMID:24333844
Molecular Function	GO:0005515	protein binding	ABCD3	IPI	UniProtKB:P33897	Human	PMID:10551832
Molecular Function	GO:0005515	protein binding	ABCD3	IPI	UniProtKB:Q61285	Human	PMID:10551832
Molecular Function	GO:0005515	protein binding	ABCD3	IPI	UniProtKB:P40855	Human	PMID:10704444
Molecular Function	GO:0005515	protein binding	ABCD3	IPI	UniProtKB:P40855	Human	PMID:10777694
Molecular Function	GO:0005515	protein binding	ABCD3	IPI	UniProtKB:P40855	Human	PMID:11453642
Molecular Function	GO:0005515	protein binding	ABCD3	IPI	UniProtKB:P40855	Human	PMID:11590176
Molecular Function	GO:0005515	protein binding	ABCD3	IPI	UniProtKB:P40855-1	Human	PMID:11883941
Molecular Function	GO:0005515	protein binding	ABCD3	IPI	UniProtKB:P40855-2	Human	PMID:11883941
Molecular Function	GO:0005515	protein binding	ABCD3	IPI	UniProtKB:P40855-4	Human	PMID:11883941
Molecular Function	GO:0005515	protein binding	ABCD3	IPI	UniProtKB:P40855	Human	PMID:14709540
Molecular Function	GO:0005515	protein binding	ABCD3	IPI	UniProtKB:P40855	Human	PMID:16344115
Molecular Function	GO:0005515	protein binding	ABCD3	IPI	UniProtKB:P33897	Human	PMID:17609205
Molecular Function	GO:0005515	protein binding	ABCD3	IPI	UniProtKB:P40855	Human	PMID:21102411
Molecular Function	GO:0005515	protein binding	Abcd3	IPI	UniProtKB:Q8VCI5	Mouse	MGI:MGI:5320280|PMID:19010322
Molecular Function	GO:0005515	protein binding	Abcd3	IPI	RGD:1562128	Rat	PMID:12176987|RGD:1598654
Molecular Function	GO:0042803	protein homodimerization activity	ABCD3	IDA		Human	PMID:17609205
Molecular Function	GO:0043621	protein self-association	Abcd3	IDA		Rat	PMID:11883951|RGD:1358265
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	ABCD3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	ABCD3	HDA		Human	PMID:19946888
Cellular Component	GO:0005743	mitochondrial inner membrane	Abcd3	HDA		Mouse	PMID:12865426
Cellular Component	GO:0005739	mitochondrion	Abcd3	HDA		Mouse	PMID:14651853
Cellular Component	GO:0005739	mitochondrion	Abcd3	HDA		Mouse	PMID:18614015
Cellular Component	GO:0005739	mitochondrion	Abcd3	IDA		Rat	PMID:11341945|RGD:1598656
Cellular Component	GO:0005739	mitochondrion	Abcd3	IDA		Rat	PMID:19010322|RGD:8553510
Cellular Component	GO:0005782	peroxisomal matrix	ABCD3	IDA		Human	PMID:9765053
Cellular Component	GO:0005778	peroxisomal membrane	ABCD3	IDA		Human	PMID:17609205
Cellular Component	GO:0005778	peroxisomal membrane	Abcd3	IDA		Mouse	PMID:12915479
Cellular Component	GO:0005778	peroxisomal membrane	Abcd3	IDA		Rat	PMID:11883951|RGD:1358265
Cellular Component	GO:0005778	peroxisomal membrane	Abcd3	IDA		Rat	PMID:14561759|RGD:1580664
Cellular Component	GO:0005777	peroxisome	ABCD3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005777	peroxisome	ABCD3	IDA		Human	PMID:10704444
Cellular Component	GO:0005777	peroxisome	ABCD3	IDA		Human	PMID:11453642
Cellular Component	GO:0005777	peroxisome	ABCD3	IDA		Human	PMID:16344115
Cellular Component	GO:0005777	peroxisome	ABCD3	IDA		Human	PMID:17542813
Cellular Component	GO:0005777	peroxisome	ABCD3	IDA		Human	PMID:19479899
Cellular Component	GO:0005777	peroxisome	ABCD3	IDA		Human	PMID:20007743
Cellular Component	GO:0005777	peroxisome	ABCD3	IDA		Human	PMID:24333844
Cellular Component	GO:0005777	peroxisome	ABCD3	IDA		Human	PMID:9425230
Cellular Component	GO:0005777	peroxisome	ABCD3	IDA		Human	PMID:9922452
Cellular Component	GO:0005777	peroxisome	Abcd3	IDA		Mouse	MGI:MGI:5320280|PMID:19010322
Cellular Component	GO:0005777	peroxisome	Abcd3	IDA		Mouse	PMID:21502359
Cellular Component	GO:0005777	peroxisome	Abcd3	IDA		Mouse	PMID:28209736
Cellular Component	GO:0005777	peroxisome	Abcd3	IDA		Mouse	PMID:28930673
Cellular Component	GO:0005777	peroxisome	Abcd3	IDA		Mouse	PMID:21460186
Cellular Component	GO:0005777	peroxisome	Abcd3	IDA		Rat	PMID:10366717|RGD:8554507
Biological Process	GO:0015721	bile acid and bile salt transport	Abcd3	IMP		Mouse	MGI:MGI:5613029|PMID:25168382
Biological Process	GO:0006699	bile acid biosynthetic process	Abcd3	IMP		Mouse	MGI:MGI:5613029|PMID:25168382
Biological Process	GO:0006635	fatty acid beta-oxidation	ABCD3	IDA		Human	PMID:24333844
Biological Process	GO:0006635	fatty acid beta-oxidation	ABCD3	IGI	UniProtKB:P33897	Human	PMID:9425230
Biological Process	GO:0006633	fatty acid biosynthetic process	ABCD3	IMP		Human	PMID:25168382
Biological Process	GO:0006869	lipid transport	Abcd3	IMP		Mouse	MGI:MGI:5613029|PMID:25168382
Biological Process	GO:0015910	long-chain fatty acid import into peroxisome	ABCD3	IMP		Human	PMID:24333844
Biological Process	GO:0007031	peroxisome organization	ABCD3	IDA		Human	PMID:9425230
Biological Process	GO:0007031	peroxisome organization	ABCD3	IMP		Human	PMID:9765053
Biological Process	GO:1903512	phytanic acid metabolic process	Abcd3	IMP		Mouse	MGI:MGI:5613029|PMID:25168382
Biological Process	GO:0014070	response to organic cyclic compound	Abcd3	IEP		Rat	PMID:11341945|RGD:1598656
Biological Process	GO:0009410	response to xenobiotic stimulus	Abcd3	IEP		Rat	PMID:9108325|RGD:1598657
Biological Process	GO:0042760	very long-chain fatty acid catabolic process	ABCD3	IGI	UniProtKB:P33897	Human	PMID:9425230
Biological Process	GO:0000038	very long-chain fatty acid metabolic process	ABCD3	IDA		Human	PMID:29397936

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern