Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ABI3BP
  • Mouse genes Abi3bp
  • Rat genes Abi3bp
  • Zfish genes abi3bpb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Abi3bp

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0051015	actin filament binding	Abi3bp	IDA		Rat	PMID:22485184|RGD:42721990
Molecular Function	GO:0005518	collagen binding	Abi3bp	IDA		Mouse	PMID:18757743
Molecular Function	GO:0005539	glycosaminoglycan binding	Abi3bp	IDA		Mouse	PMID:18757743
Molecular Function	GO:0008201	heparin binding	Abi3bp	IDA		Mouse	PMID:18757743
Cellular Component	GO:0062023	collagen-containing extracellular matrix	ABI3BP	HDA		Human	PMID:20551380
Cellular Component	GO:0062023	collagen-containing extracellular matrix	ABI3BP	HDA		Human	PMID:27559042
Cellular Component	GO:0062023	collagen-containing extracellular matrix	ABI3BP	HDA		Human	PMID:28675934
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Abi3bp	HDA		Mouse	MGI:MGI:6201834|PMID:22159717
Cellular Component	GO:0043198	dendritic shaft	Abi3bp	IDA		Rat	PMID:22496823|RGD:42722000
Cellular Component	GO:0043197	dendritic spine	Abi3bp	IDA		Rat	PMID:22485184|RGD:42721990
Cellular Component	GO:0043197	dendritic spine	Abi3bp	IDA		Rat	PMID:22496823|RGD:42722000
Cellular Component	GO:0031012	extracellular matrix	Abi3bp	IDA		Mouse	PMID:18757743
Cellular Component	GO:0005576	extracellular region	ABI3BP	HDA		Human	PMID:27068509
Cellular Component	GO:0005615	extracellular space	ABI3BP	HDA		Human	PMID:20551380
Cellular Component	GO:0005614	interstitial matrix	Abi3bp	IDA		Mouse	PMID:18757743
Cellular Component	GO:0030027	lamellipodium	Abi3bp	IDA		Rat	PMID:18480067|RGD:42721999
Cellular Component	GO:0014069	postsynaptic density	Abi3bp	IDA		Rat	PMID:22485184|RGD:42721990
Biological Process	GO:0030198	extracellular matrix organization	Abi3bp	IDA		Mouse	PMID:18757743
Biological Process	GO:0008285	negative regulation of cell population proliferation	Abi3bp	IMP		Mouse	MGI:MGI:6101245|PMID:25296984
Biological Process	GO:1904597	negative regulation of connective tissue replacement involved in inflammatory response wound healing	Abi3bp	IMP		Mouse	MGI:MGI:6101245|PMID:25296984
Biological Process	GO:1905209	positive regulation of cardiocyte differentiation	Abi3bp	IMP		Mouse	MGI:MGI:6101245|PMID:25296984
Biological Process	GO:0010811	positive regulation of cell-substrate adhesion	Abi3bp	IDA		Mouse	PMID:18757743
Biological Process	GO:2000249	regulation of actin cytoskeleton reorganization	Abi3bp	IMP		Rat	PMID:22485184|RGD:42721990
Biological Process	GO:0061001	regulation of dendritic spine morphogenesis	Abi3bp	IMP		Rat	PMID:22485184|RGD:42721990
Biological Process	GO:0099151	regulation of postsynaptic density assembly	Abi3bp	IMP		Rat	PMID:22485184|RGD:42721990

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern