Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ABLIM1
  • Mouse genes Ablim1
  • Rat genes Ablim1
  • Zfish genes ablim1a,ablim1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ablim1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003779	actin binding	Ablim1	IDA		Mouse	PMID:9245787
Molecular Function	GO:0005515	protein binding	ABLIM1	IPI	UniProtKB:O95751	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	ABLIM1	IPI	UniProtKB:Q9H257	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	Ablim1	IPI	UniProtKB:Q62108	Mouse	MGI:MGI:6092779|PMID:28671696
Molecular Function	GO:0005515	protein binding	Ablim1	IPI	UniProtKB:Q62108	Mouse	MGI:MGI:4359331|PMID:19455133
Molecular Function	GO:0005515	protein binding	Ablim1	IPI	RGD:621660	Rat	PMID:15024025|RGD:1581350
Cellular Component	GO:0015629	actin cytoskeleton	Ablim1	IDA		Mouse	PMID:9245787
Cellular Component	GO:0030027	lamellipodium	ABLIM1	IDA		Human	PMID:22684256
Cellular Component	GO:0014069	postsynaptic density	Ablim1	IDA		Mouse	PMID:17114649
Cellular Component	GO:0001725	stress fiber	ABLIM1	IDA		Human	PMID:22684256
Biological Process	GO:0007411	axon guidance	Ablim1	IDA		Mouse	PMID:11163266
Biological Process	GO:0060271	cilium assembly	ABLIM1	IMP		Human	PMID:22684256
Biological Process	GO:0030032	lamellipodium assembly	ABLIM1	IMP		Human	PMID:22684256
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Ablim1	IMP		Mouse	PMID:17194709
Biological Process	GO:0006366	transcription by RNA polymerase II	Ablim1	IMP		Mouse	PMID:17194709

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern