Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes AEBP1
  • Mouse genes Aebp1
  • Rat genes Aebp1
  • Zfish genes aebp1a,aebp1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Aebp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004180	carboxypeptidase activity	Aebp1	IDA		Mouse	PMID:7477299
Molecular Function	GO:0005518	collagen binding	AEBP1	IDA		Human	PMID:29606302
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	AEBP1	IDA		Human	PMID:15654748
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	AEBP1	IMP		Human	PMID:15654748
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	AEBP1	IDA		Human	PMID:15654748
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Aebp1	IDA		Mouse	PMID:7477299
Cellular Component	GO:0062023	collagen-containing extracellular matrix	AEBP1	HDA		Human	PMID:20551380
Cellular Component	GO:0062023	collagen-containing extracellular matrix	AEBP1	HDA		Human	PMID:28327460
Cellular Component	GO:0062023	collagen-containing extracellular matrix	AEBP1	HDA		Human	PMID:25037231
Cellular Component	GO:0062023	collagen-containing extracellular matrix	AEBP1	HDA		Human	PMID:28675934
Cellular Component	GO:0070062	extracellular exosome	AEBP1	HDA		Human	PMID:19199708
Cellular Component	GO:0005576	extracellular region	AEBP1	HDA		Human	PMID:27068509
Cellular Component	GO:0005615	extracellular space	AEBP1	HDA		Human	PMID:20551380
Cellular Component	GO:0005615	extracellular space	Aebp1	HDA		Mouse	MGI:MGI:5640941|PMID:24006456
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	AEBP1	IMP		Human	PMID:15654748
Biological Process	GO:1904026	regulation of collagen fibril organization	AEBP1	IDA		Human	PMID:29606302
Biological Process	GO:0006355	regulation of DNA-templated transcription	Aebp1	IDA		Mouse	PMID:7477299

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern