Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes AFM
  • Mouse genes Afm
  • Rat genes Afm
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Afm

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	AFM	IPI	UniProtKB:P27467	Human	PMID:26902720
Molecular Function	GO:0005515	protein binding	AFM	IPI	UniProtKB:P56703	Human	PMID:26902720
Molecular Function	GO:0008431	vitamin E binding	AFM	IPI	CHEBI:18145|CHEBI:18185	Human	PMID:12463752
Molecular Function	GO:0008431	vitamin E binding	AFM	IDA		Human	PMID:15952736
Cellular Component	GO:0072562	blood microparticle	AFM	HDA		Human	PMID:22516433
Cellular Component	GO:0070062	extracellular exosome	AFM	HDA		Human	PMID:23533145
Cellular Component	GO:0005615	extracellular space	AFM	IDA		Human	PMID:12463752
Cellular Component	GO:0005615	extracellular space	AFM	IDA		Human	PMID:15952736
Cellular Component	GO:0005615	extracellular space	AFM	HDA		Human	PMID:16502470
Cellular Component	GO:0005615	extracellular space	AFM	IDA		Human	PMID:19046407
Cellular Component	GO:0005615	extracellular space	AFM	IDA		Human	PMID:26902720
Cellular Component	GO:0005615	extracellular space	Afm	IDA		Rat	PMID:7509788|RGD:724795
Biological Process	GO:0050821	protein stabilization	AFM	IDA		Human	PMID:26902720
Biological Process	GO:0071693	protein transport within extracellular region	AFM	IMP		Human	PMID:26902720
Biological Process	GO:0051180	vitamin transport	AFM	IDA		Human	PMID:12463752
Biological Process	GO:0051180	vitamin transport	AFM	IDA		Human	PMID:19046407

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern