Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes AGBL4
  • Mouse genes Agbl4
  • Rat genes Agbl4
  • Zfish genes agbl4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Agbl4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004181	metallocarboxypeptidase activity	Agbl4	IDA		Mouse	MGI:MGI:5607346|PMID:25103237
Molecular Function	GO:0004181	metallocarboxypeptidase activity	Agbl4	IDA		Mouse	MGI:MGI:6149282|PMID:29593216
Molecular Function	GO:0004181	metallocarboxypeptidase activity	Agbl4	IMP		Mouse	MGI:MGI:4849873|PMID:21074048
Molecular Function	GO:0004181	metallocarboxypeptidase activity	Agbl4	IMP		Mouse	MGI:MGI:5770179|PMID:26829768
Molecular Function	GO:0004181	metallocarboxypeptidase activity	Agbl4	IDA		Mouse	MGI:MGI:4849873|PMID:21074048
Molecular Function	GO:0005515	protein binding	Agbl4	IPI	UniProtKB:Q6PDN3	Mouse	MGI:MGI:4849873|PMID:21074048
Molecular Function	GO:0015631	tubulin binding	Agbl4	IDA		Mouse	MGI:MGI:4849873|PMID:21074048
Cellular Component	GO:0030424	axon	Agbl4	IGI	MGI:MGI:1918244	Mouse	MGI:MGI:6269036|PMID:30420556
Cellular Component	GO:1904115	axon cytoplasm	Agbl4	IGI	MGI:MGI:1918244	Mouse	MGI:MGI:6269036|PMID:30420556
Cellular Component	GO:0005814	centriole	AGBL4	IDA		Human	PMID:23085998
Cellular Component	GO:0036064	ciliary basal body	AGBL4	IDA		Human	PMID:23085998
Cellular Component	GO:0005829	cytosol	Agbl4	IDA		Mouse	MGI:MGI:4887331|PMID:17244818
Cellular Component	GO:0005794	Golgi apparatus	AGBL4	IDA		Human	PMID:23085998
Biological Process	GO:0098957	anterograde axonal transport of mitochondrion	Agbl4	IGI	MGI:MGI:1918244	Mouse	PMID:30420556
Biological Process	GO:0098930	axonal transport	Agbl4	IGI	MGI:MGI:1918244	Mouse	PMID:30420556
Biological Process	GO:0035609	C-terminal protein deglutamylation	Agbl4	IDA		Mouse	MGI:MGI:4849873|PMID:21074048
Biological Process	GO:0035609	C-terminal protein deglutamylation	Agbl4	IMP		Mouse	MGI:MGI:4849873|PMID:21074048
Biological Process	GO:0021954	central nervous system neuron development	Agbl4	IGI	MGI:MGI:1918244	Mouse	PMID:30420556
Biological Process	GO:0051607	defense response to virus	Agbl4	IMP		Mouse	MGI:MGI:5770179|PMID:26829768
Biological Process	GO:0008285	negative regulation of cell population proliferation	Agbl4	IMP		Mouse	PMID:29593216
Biological Process	GO:0008285	negative regulation of cell population proliferation	Agbl4	IGI	MGI:MGI:2159437	Mouse	PMID:29593216
Biological Process	GO:2000060	positive regulation of ubiquitin-dependent protein catabolic process	Agbl4	IMP	MGI:MGI:5788002	Mouse	PMID:29593216
Biological Process	GO:0035608	protein deglutamylation	Agbl4	IMP		Mouse	MGI:MGI:5770179|PMID:26829768
Biological Process	GO:0035608	protein deglutamylation	Agbl4	IMP	MGI:MGI:5788002	Mouse	PMID:29593216
Biological Process	GO:0035608	protein deglutamylation	Agbl4	IGI	MGI:MGI:1918244	Mouse	PMID:30420556
Biological Process	GO:0035610	protein side chain deglutamylation	Agbl4	IDA		Mouse	MGI:MGI:5607346|PMID:25103237
Biological Process	GO:0035610	protein side chain deglutamylation	Agbl4	IMP		Mouse	MGI:MGI:5770179|PMID:26829768
Biological Process	GO:0035610	protein side chain deglutamylation	Agbl4	IDA		Mouse	MGI:MGI:4849873|PMID:21074048
Biological Process	GO:0035610	protein side chain deglutamylation	Agbl4	IMP		Mouse	MGI:MGI:4849873|PMID:21074048
Biological Process	GO:0035610	protein side chain deglutamylation	Agbl4	IDA		Mouse	MGI:MGI:6149282|PMID:29593216
Biological Process	GO:0120222	regulation of blastocyst development	Agbl4	IMP	MGI:MGI:5788002	Mouse	PMID:29593216
Biological Process	GO:0098958	retrograde axonal transport of mitochondrion	Agbl4	IGI	MGI:MGI:1918244	Mouse	PMID:30420556

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern