Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes AGTPBP1
  • Mouse genes Agtpbp1
  • Rat genes Agtpbp1
  • Zfish genes agtpbp1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Agtpbp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004181	metallocarboxypeptidase activity	AGTPBP1	IDA		Human	PMID:22170066
Molecular Function	GO:0004181	metallocarboxypeptidase activity	Agtpbp1	IDA		Mouse	MGI:MGI:6149282|PMID:29593216
Molecular Function	GO:0004181	metallocarboxypeptidase activity	Agtpbp1	IDA		Mouse	MGI:MGI:6810285|PMID:22170066
Molecular Function	GO:0004181	metallocarboxypeptidase activity	Agtpbp1	IMP		Mouse	MGI:MGI:6276488|PMID:30420557
Molecular Function	GO:0004181	metallocarboxypeptidase activity	Agtpbp1	IDA		Mouse	MGI:MGI:5607346|PMID:25103237
Molecular Function	GO:0004181	metallocarboxypeptidase activity	Agtpbp1	IDA		Mouse	MGI:MGI:4849873|PMID:21074048
Molecular Function	GO:0004181	metallocarboxypeptidase activity	Agtpbp1	IMP		Mouse	MGI:MGI:4849873|PMID:21074048
Molecular Function	GO:0005515	protein binding	Agtpbp1	IPI	UniProtKB:Q6PDN3	Mouse	MGI:MGI:4849873|PMID:21074048
Molecular Function	GO:0015631	tubulin binding	Agtpbp1	IDA		Mouse	MGI:MGI:4849873|PMID:21074048
Cellular Component	GO:0005737	cytoplasm	AGTPBP1	IDA		Human	PMID:23085998
Cellular Component	GO:0005737	cytoplasm	Agtpbp1	IDA		Mouse	PMID:11083920
Cellular Component	GO:0005829	cytosol	Agtpbp1	IDA		Mouse	MGI:MGI:4887331|PMID:17244818
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	AGTPBP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	Agtpbp1	IDA		Mouse	MGI:MGI:4821195|PMID:20620870
Cellular Component	GO:0005730	nucleolus	AGTPBP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	AGTPBP1	IDA		Human	PMID:23085998
Cellular Component	GO:0005634	nucleus	Agtpbp1	IDA		Mouse	PMID:11083920
Biological Process	GO:0007628	adult walking behavior	Agtpbp1	IMP	MGI:MGI:1857523	Mouse	PMID:16952463
Biological Process	GO:0098957	anterograde axonal transport of mitochondrion	Agtpbp1	IGI	MGI:MGI:1918244	Mouse	PMID:30420556
Biological Process	GO:0098930	axonal transport	Agtpbp1	IGI	MGI:MGI:1918244	Mouse	PMID:30420556
Biological Process	GO:0035609	C-terminal protein deglutamylation	AGTPBP1	IDA		Human	PMID:22170066
Biological Process	GO:0035609	C-terminal protein deglutamylation	Agtpbp1	IDA		Mouse	MGI:MGI:6810285|PMID:22170066
Biological Process	GO:0035609	C-terminal protein deglutamylation	Agtpbp1	IMP		Mouse	MGI:MGI:4849873|PMID:21074048
Biological Process	GO:0035609	C-terminal protein deglutamylation	Agtpbp1	IDA		Mouse	MGI:MGI:4849873|PMID:21074048
Biological Process	GO:0021954	central nervous system neuron development	Agtpbp1	IGI	MGI:MGI:1918244	Mouse	PMID:30420556
Biological Process	GO:0021702	cerebellar Purkinje cell differentiation	Agtpbp1	IMP		Mouse	MGI:MGI:2159417|PMID:11884758
Biological Process	GO:0021702	cerebellar Purkinje cell differentiation	Agtpbp1	IMP		Mouse	MGI:MGI:3614720|PMID:16465590
Biological Process	GO:0021702	cerebellar Purkinje cell differentiation	Agtpbp1	IMP		Mouse	MGI:MGI:4849873|PMID:21074048
Biological Process	GO:0021702	cerebellar Purkinje cell differentiation	Agtpbp1	IGI	MGI:MGI:2443047	Mouse	PMID:30420556
Biological Process	GO:0021702	cerebellar Purkinje cell differentiation	Agtpbp1	IMP	MGI:MGI:6270378	Mouse	PMID:30420556
Biological Process	GO:0021702	cerebellar Purkinje cell differentiation	Agtpbp1	IMP	MGI:MGI:1857523	Mouse	PMID:30420556
Biological Process	GO:0021702	cerebellar Purkinje cell differentiation	Agtpbp1	IMP	MGI:MGI:1856535	Mouse	PMID:10630211
Biological Process	GO:0021680	cerebellar Purkinje cell layer development	Agtpbp1	IMP		Mouse	PMID:21052544
Biological Process	GO:0021549	cerebellum development	Agtpbp1	IMP	MGI:MGI:1856535	Mouse	PMID:7891151
Biological Process	GO:0043009	chordate embryonic development	agtpbp1	IMP	ZFIN:ZDB-MRPHLNO-131125-1	Zfish	PMID:24022483
Biological Process	GO:0001754	eye photoreceptor cell differentiation	Agtpbp1	IMP		Mouse	MGI:MGI:3614720|PMID:16465590
Biological Process	GO:0007005	mitochondrion organization	Agtpbp1	IMP		Mouse	MGI:MGI:4821195|PMID:20620870
Biological Process	GO:0008285	negative regulation of cell population proliferation	Agtpbp1	IGI	MGI:MGI:1918244	Mouse	PMID:29593216
Biological Process	GO:0008285	negative regulation of cell population proliferation	Agtpbp1	IMP		Mouse	PMID:29593216
Biological Process	GO:0050905	neuromuscular process	Agtpbp1	IMP		Mouse	MGI:MGI:2159417|PMID:11884758
Biological Process	GO:0050905	neuromuscular process	Agtpbp1	IGI	MGI:MGI:109482	Mouse	PMID:10630211
Biological Process	GO:0042133	neurotransmitter metabolic process	Agtpbp1	IMP	MGI:MGI:1856535	Mouse	PMID:8100981
Biological Process	GO:0021772	olfactory bulb development	Agtpbp1	IMP		Mouse	MGI:MGI:2159417|PMID:11884758
Biological Process	GO:2000060	positive regulation of ubiquitin-dependent protein catabolic process	Agtpbp1	IMP	MGI:MGI:1857523	Mouse	PMID:29593216
Biological Process	GO:0035608	protein deglutamylation	AGTPBP1	IMP		Human	PMID:30420557
Biological Process	GO:0035608	protein deglutamylation	Agtpbp1	IGI	MGI:MGI:1918244	Mouse	PMID:30420556
Biological Process	GO:0035608	protein deglutamylation	Agtpbp1	IMP	MGI:MGI:1857523	Mouse	PMID:30420556
Biological Process	GO:0035608	protein deglutamylation	Agtpbp1	IMP	MGI:MGI:1857523	Mouse	PMID:29593216
Biological Process	GO:0035610	protein side chain deglutamylation	AGTPBP1	IDA		Human	PMID:22170066
Biological Process	GO:0035610	protein side chain deglutamylation	Agtpbp1	IMP		Mouse	MGI:MGI:4849873|PMID:21074048
Biological Process	GO:0035610	protein side chain deglutamylation	Agtpbp1	IDA		Mouse	MGI:MGI:6149282|PMID:29593216
Biological Process	GO:0035610	protein side chain deglutamylation	Agtpbp1	IDA		Mouse	MGI:MGI:5607346|PMID:25103237
Biological Process	GO:0035610	protein side chain deglutamylation	Agtpbp1	IDA		Mouse	MGI:MGI:6810285|PMID:22170066
Biological Process	GO:0035610	protein side chain deglutamylation	Agtpbp1	IMP		Mouse	MGI:MGI:6276488|PMID:30420557
Biological Process	GO:0035610	protein side chain deglutamylation	Agtpbp1	IDA		Mouse	MGI:MGI:4849873|PMID:21074048
Biological Process	GO:0060041	retina development in camera-type eye	Agtpbp1	IMP		Mouse	PMID:21052544
Biological Process	GO:0060041	retina development in camera-type eye	Agtpbp1	IMP	MGI:MGI:1856535	Mouse	PMID:24791901
Biological Process	GO:0098958	retrograde axonal transport of mitochondrion	Agtpbp1	IGI	MGI:MGI:1918244	Mouse	PMID:30420556
Biological Process	GO:0033077	T cell differentiation in thymus	agtpbp1	IMP	ZFIN:ZDB-GENO-160714-20	Zfish	PMID:26161877

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern