Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes AHDC1
  • Mouse genes Ahdc1
  • Rat genes Ahdc1
  • Zfish genes ahdc1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ahdc1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003700	DNA-binding transcription factor activity	AHDC1	IDA		Human	PMID:35585237
Molecular Function	GO:0140585	promoter-enhancer loop anchoring activity	AHDC1	IDA		Human	PMID:35585237
Molecular Function	GO:0005515	protein binding	AHDC1	IPI	UniProtKB:P54253	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	AHDC1	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	AHDC1	IPI	UniProtKB:P54253	Human	PMID:32814053
Cellular Component	GO:0005634	nucleus	AHDC1	IDA		Human	PMID:33644933
Biological Process	GO:0001707	mesoderm formation	AHDC1	IDA		Human	PMID:35585237
Biological Process	GO:0001707	mesoderm formation	Ahdc1	IMP		Mouse	MGI:MGI:7294317|PMID:35585237
Biological Process	GO:0043589	skin morphogenesis	AHDC1	IDA		Human	PMID:35585237
Biological Process	GO:0043589	skin morphogenesis	Ahdc1	IMP		Mouse	MGI:MGI:7294317|PMID:35585237

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern