Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Ahi1

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes AHI1
- Mouse genes Ahi1
- Rat genes Ahi1
- Zfish genes ahi1
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ahi1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	AHI1	IPI	UniProtKB:Q8N157	Human	PMID:23532844
Molecular Function	GO:0005515	protein binding	AHI1	IPI	UniProtKB:O15259	Human	PMID:18633336
Molecular Function	GO:0005515	protein binding	AHI1	IPI	UniProtKB:P50570	Human	PMID:22623184
Molecular Function	GO:0005515	protein binding	AHI1	IPI	UniProtKB:O15259	Human	PMID:23532844
Molecular Function	GO:0005515	protein binding	AHI1	IPI	UniProtKB:P54257	Human	PMID:23532844
Molecular Function	GO:0005515	protein binding	AHI1	IPI	UniProtKB:O43184	Human	PMID:25825872
Molecular Function	GO:0005515	protein binding	Ahi1	IPI	UniProtKB:Q9JKC6	Mouse	MGI:MGI:5490923\|PMID:23658157
Molecular Function	GO:0005515	protein binding	Ahi1	IPI	UniProtKB:O35668	Mouse	MGI:MGI:5498436\|PMID:23532844
Molecular Function	GO:0005515	protein binding	Ahi1	IPI	UniProtKB:Q5SW45	Mouse	MGI:MGI:5013991\|PMID:21565611
Molecular Function	GO:0005515	protein binding	Ahi1	IPI	UniProtKB:O35668	Mouse	MGI:MGI:4939576\|PMID:21146532
Molecular Function	GO:0005515	protein binding	Ahi1	IPI	MGI:MGI:2144877	Mouse	PMID:29899041
Molecular Function	GO:0005515	protein binding	Ahi1	IPI	PR:Q8K0U3	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	Ahi1	IPI	PR:Q8CFW7	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	Ahi1	IPI	PR:Q3U284	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	Ahi1	IPI	PR:Q3UK10	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	Ahi1	IPI	PR:Q5SW45	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	Ahi1	IPI	PR:Q922M3	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	Ahi1	IPI	PR:Q9R1S0	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	Ahi1	IPI	PR:Q2MV57	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	Ahi1	IPI	PR:Q8BZ64	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	Ahi1	IPI	RGD:68327	Rat	PMID:23658157\|RGD:11537396
Cellular Component	GO:0005912	adherens junction	AHI1	IDA		Human	PMID:18633336
Cellular Component	GO:0005911	cell-cell junction	AHI1	IDA		Human	PMID:18633336
Cellular Component	GO:0005814	centriole	Ahi1	IDA		Mouse	PMID:19625297
Cellular Component	GO:0005813	centrosome	AHI1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005813	centrosome	AHI1	IDA		Human	PMID:18633336
Cellular Component	GO:0036064	ciliary basal body	AHI1	IDA		Human	PMID:18633336
Cellular Component	GO:0036064	ciliary basal body	Ahi1	IDA		Mouse	MGI:MGI:4437526\|PMID:20081859
Cellular Component	GO:0036064	ciliary basal body	Ahi1	IDA		Mouse	PMID:19718039
Cellular Component	GO:0036064	ciliary basal body	Ahi1	IDA		Mouse	PMID:19625297
Cellular Component	GO:0005929	cilium	AHI1	IDA		Human	PMID:18633336
Cellular Component	GO:0005929	cilium	Ahi1	IDA		Mouse	MGI:MGI:4437526\|PMID:20081859
Cellular Component	GO:0005737	cytoplasm	Ahi1	IDA		Rat	PMID:23658157\|RGD:11537396
Cellular Component	GO:0036038	MKS complex	Ahi1	IDA		Mouse	PMID:22179047
Cellular Component	GO:0097730	non-motile cilium	Ahi1	IDA		Mouse	PMID:19718039
Cellular Component	GO:0097730	non-motile cilium	Ahi1	IDA		Mouse	PMID:19625297
Cellular Component	GO:0120206	photoreceptor distal connecting cilium	Ahi1	IDA		Mouse	PMID:29899041
Cellular Component	GO:0001750	photoreceptor outer segment	Ahi1	IDA		Mouse	PMID:20592197
Biological Process	GO:0007417	central nervous system development	Ahi1	IGI	UniProtKB:F8W3V6	Mouse	MGI:MGI:5306539\|PMID:21959375
Biological Process	GO:0060271	cilium assembly	Ahi1	IMP		Mouse	MGI:MGI:4360424\|PMID:19625297
Biological Process	GO:0060271	cilium assembly	Ahi1	IMP		Mouse	MGI:MGI:5306539\|PMID:21959375
Biological Process	GO:0060271	cilium assembly	Ahi1	IMP	MGI:MGI:4360696	Mouse	PMID:20592197
Biological Process	GO:0035844	cloaca development	Ahi1	IGI	UniProtKB:F8W3V6	Mouse	MGI:MGI:5306539\|PMID:21959375
Biological Process	GO:0007368	determination of left/right symmetry	ahi1	IMP	ZFIN:ZDB-MRPHLNO-120314-2	Zfish	PMID:21959375
Biological Process	GO:1990403	embryonic brain development	Ahi1	IEP		Rat	PMID:19819228\|RGD:11537397
Biological Process	GO:0042462	eye photoreceptor cell development	Ahi1	IDA		Mouse	MGI:MGI:4437526\|PMID:20081859
Biological Process	GO:0001947	heart looping	Ahi1	IGI	UniProtKB:F8W3V6	Mouse	MGI:MGI:5306539\|PMID:21959375
Biological Process	GO:0030902	hindbrain development	Ahi1	IGI	UniProtKB:F8W3V6	Mouse	MGI:MGI:5306539\|PMID:21959375
Biological Process	GO:0001738	morphogenesis of a polarized epithelium	Ahi1	IMP		Mouse	MGI:MGI:5306539\|PMID:21959375
Biological Process	GO:0044458	motile cilium assembly	ahi1	IMP	ZFIN:ZDB-MRPHLNO-120314-2	Zfish	PMID:21959375
Biological Process	GO:0043066	negative regulation of apoptotic process	Ahi1	IMP		Mouse	MGI:MGI:4437526\|PMID:20081859
Biological Process	GO:0046325	negative regulation of glucose import	Ahi1	IMP		Rat	PMID:20045148\|RGD:11537398
Biological Process	GO:1905515	non-motile cilium assembly	Ahi1	IMP		Mouse	PMID:19625297
Biological Process	GO:0071599	otic vesicle development	Ahi1	IGI	UniProtKB:F8W3V6	Mouse	MGI:MGI:5306539\|PMID:21959375
Biological Process	GO:0071599	otic vesicle development	ahi1	IMP	ZFIN:ZDB-MRPHLNO-120314-2	Zfish	PMID:25616960
Biological Process	GO:0035845	photoreceptor cell outer segment organization	Ahi1	IGI	UniProtKB:Q9QY53	Mouse	MGI:MGI:4437526\|PMID:20081859
Biological Process	GO:0035845	photoreceptor cell outer segment organization	Ahi1	IMP	MGI:MGI:4360696	Mouse	PMID:20592197
Biological Process	GO:0035845	photoreceptor cell outer segment organization	ahi1	IMP	ZFIN:ZDB-GENO-170320-6	Zfish	PMID:28118669
Biological Process	GO:0010628	positive regulation of gene expression	Ahi1	IMP	MGI:MGI:4360696	Mouse	PMID:20592197
Biological Process	GO:0045927	positive regulation of growth	Ahi1	IDA		Mouse	MGI:MGI:5619473\|PMID:18936234
Biological Process	GO:0010976	positive regulation of neuron projection development	Ahi1	IMP		Mouse	MGI:MGI:3814764\|PMID:18636121
Biological Process	GO:0030862	positive regulation of polarized epithelial cell differentiation	Ahi1	IMP		Mouse	MGI:MGI:5306539\|PMID:21959375
Biological Process	GO:0002092	positive regulation of receptor internalization	Ahi1	IMP		Mouse	MGI:MGI:4840150\|PMID:20956301
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Ahi1	IMP		Mouse	MGI:MGI:4840150\|PMID:20956301
Biological Process	GO:0039008	pronephric nephron tubule morphogenesis	Ahi1	IGI	UniProtKB:F8W3V6	Mouse	MGI:MGI:5306539\|PMID:21959375
Biological Process	GO:0008104	protein localization	Ahi1	IGI	UniProtKB:Q9QY53	Mouse	MGI:MGI:4437526\|PMID:20081859
Biological Process	GO:0033365	protein localization to organelle	Ahi1	IMP		Mouse	PMID:19625297
Biological Process	GO:0050795	regulation of behavior	Ahi1	IMP		Mouse	MGI:MGI:4840150\|PMID:20956301
Biological Process	GO:0050708	regulation of protein secretion	Ahi1	IMP		Mouse	MGI:MGI:3814764\|PMID:18636121
Biological Process	GO:0032094	response to food	Ahi1	IEP		Rat	PMID:19819228\|RGD:11537397
Biological Process	GO:0060041	retina development in camera-type eye	Ahi1	IMP	MGI:MGI:4360696	Mouse	PMID:20592197
Biological Process	GO:0010842	retina layer formation	Ahi1	IGI	UniProtKB:F8W3V6	Mouse	MGI:MGI:5306539\|PMID:21959375
Biological Process	GO:0046549	retinal cone cell development	Ahi1	IMP		Mouse	MGI:MGI:4437526\|PMID:20081859
Biological Process	GO:0031290	retinal ganglion cell axon guidance	ahi1	IMP	ZFIN:ZDB-CRISPR-191231-1	Zfish	PMID:30949029
Biological Process	GO:0031290	retinal ganglion cell axon guidance	ahi1	IMP	ZFIN:ZDB-MRPHLNO-120314-2	Zfish	PMID:30949029
Biological Process	GO:0046548	retinal rod cell development	Ahi1	IMP		Mouse	MGI:MGI:4437526\|PMID:20081859
Biological Process	GO:0065001	specification of axis polarity	Ahi1	IGI	UniProtKB:F8W3V6	Mouse	MGI:MGI:5306539\|PMID:21959375
Biological Process	GO:0021510	spinal cord development	Ahi1	IEP		Rat	PMID:19819228\|RGD:11537397
Biological Process	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	Ahi1	IMP		Mouse	MGI:MGI:4840150\|PMID:20956301
Biological Process	GO:0006903	vesicle targeting	Ahi1	IMP	MGI:MGI:4360696	Mouse	PMID:20592197
Biological Process	GO:0016192	vesicle-mediated transport	Ahi1	IMP		Mouse	PMID:19625297

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 09/17/2024 MGI 6.24

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.