Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes AMBP
  • Mouse genes Ambp
  • Rat genes Ambp
  • Zfish genes ambp
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ambp

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030246	carbohydrate binding	AMBP	EXP		Human	PMID:7513643
Molecular Function	GO:0020037	heme binding	AMBP	IDA		Human	PMID:11877257
Molecular Function	GO:0019862	IgA binding	AMBP	IDA		Human	PMID:11877257
Molecular Function	GO:0005515	protein binding	AMBP	IPI	UniProtKB:P07858	Human	PMID:16364318
Molecular Function	GO:0005515	protein binding	AMBP	IPI	UniProtKB:Q13643	Human	PMID:25416956
Molecular Function	GO:0042803	protein homodimerization activity	AMBP	IPI	UniProtKB:P02760	Human	PMID:11883904
Molecular Function	GO:0004867	serine-type endopeptidase inhibitor activity	Ambp	IDA		Rat	PMID:11307954|RGD:6904220
Molecular Function	GO:0004867	serine-type endopeptidase inhibitor activity	Ambp	IDA		Rat	PMID:3263966|RGD:150521640
Cellular Component	GO:0072562	blood microparticle	AMBP	HDA		Human	PMID:22516433
Cellular Component	GO:0009986	cell surface	Ambp	IDA		Rat	PMID:15533056|RGD:6904219
Cellular Component	GO:0062023	collagen-containing extracellular matrix	AMBP	HDA		Human	PMID:27559042
Cellular Component	GO:0062023	collagen-containing extracellular matrix	AMBP	HDA		Human	PMID:25037231
Cellular Component	GO:0062023	collagen-containing extracellular matrix	AMBP	HDA		Human	PMID:28675934
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Ambp	HDA		Mouse	MGI:MGI:6201834|PMID:22159717
Cellular Component	GO:0070062	extracellular exosome	AMBP	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	AMBP	HDA		Human	PMID:23533145
Cellular Component	GO:0005615	extracellular space	AMBP	HDA		Human	PMID:16502470
Cellular Component	GO:0005615	extracellular space	Ambp	IDA		Rat	PMID:11307954|RGD:6904220
Cellular Component	GO:0031314	extrinsic component of mitochondrial inner membrane	Ambp	IDA		Mouse	MGI:MGI:6814707|PMID:23157686
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	Ambp	IDA		Rat	PMID:1371936|RGD:632200
Cellular Component	GO:0005886	plasma membrane	AMBP	IDA		Human	PMID:12817471
Biological Process	GO:0030163	protein catabolic process	Ambp	IDA		Rat	PMID:11307954|RGD:6904220

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern