Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes AMD1
  • Mouse genes Amd1
  • Rat genes Amd1
  • Zfish genes amd1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Amd1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004014	adenosylmethionine decarboxylase activity	Amd1	IDA		Rat	PMID:10430362|RGD:1578320
Molecular Function	GO:0004014	adenosylmethionine decarboxylase activity	Amd1	IDA		Rat	PMID:1415709|RGD:7242912
Molecular Function	GO:0004014	adenosylmethionine decarboxylase activity	Amd1	IDA		Rat	PMID:21048303|RGD:7242909
Molecular Function	GO:0042802	identical protein binding	AMD1	IPI	UniProtKB:P17707	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	AMD1	IPI	UniProtKB:Q8WY91	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Amd1	IPI	UniProtKB:P98083	Mouse	MGI:MGI:3688344|PMID:15102471
Molecular Function	GO:0019810	putrescine binding	Amd1	IDA		Rat	PMID:21048303|RGD:7242909
Cellular Component	GO:0005829	cytosol	Amd1	IDA		Rat	PMID:486130|RGD:7242919
Biological Process	GO:0006595	polyamine metabolic process	Amd1	IDA		Rat	PMID:10430362|RGD:1578320
Biological Process	GO:0046500	S-adenosylmethionine metabolic process	Amd1	IDA		Rat	PMID:1415709|RGD:7242912
Biological Process	GO:0046500	S-adenosylmethionine metabolic process	Amd1	IDA		Rat	PMID:21048303|RGD:7242909
Biological Process	GO:0008295	spermidine biosynthetic process	Amd1	IDA		Rat	PMID:10430362|RGD:1578320
Biological Process	GO:0008295	spermidine biosynthetic process	Amd1	IMP		Rat	PMID:10712236|RGD:7242911
Biological Process	GO:0008295	spermidine biosynthetic process	Amd1	IDA		Rat	PMID:1415709|RGD:7242912
Biological Process	GO:0006597	spermine biosynthetic process	Amd1	IDA		Rat	PMID:10430362|RGD:1578320
Biological Process	GO:0006597	spermine biosynthetic process	Amd1	IMP		Rat	PMID:10712236|RGD:7242911
Biological Process	GO:0006597	spermine biosynthetic process	Amd1	IDA		Rat	PMID:1415709|RGD:7242912

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern