Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ANKS1B
  • Mouse genes Anks1b
  • Rat genes Anks1b
  • Zfish genes anks1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Anks1b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0046875	ephrin receptor binding	ANKS1B	IPI	UniProtKB:O09127	Human	PMID:17875921
Molecular Function	GO:0005515	protein binding	Anks1b	IPI	PR:Q99PW8	Mouse	PMID:26085624
Molecular Function	GO:0005515	protein binding	Anks1b	IPI	PR:O70589	Mouse	PMID:26085624
Molecular Function	GO:0005515	protein binding	Anks1b	IPI	PR:Q01097	Mouse	PMID:26085624
Cellular Component	GO:0005813	centrosome	ANKS1B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0098978	glutamatergic synapse	Anks1b	EXP		Rat	PMID:17334360|RGD:13702197
Cellular Component	GO:0098978	glutamatergic synapse	Anks1b	IDA		Rat	PMID:17334360|RGD:13702197
Cellular Component	GO:0098978	glutamatergic synapse	Anks1b	IMP		Rat	PMID:17334360|RGD:13702197
Cellular Component	GO:0098978	glutamatergic synapse	Anks1b	IDA		Rat	PMID:20575057|RGD:13702247
Cellular Component	GO:0098686	hippocampal mossy fiber to CA3 synapse	Anks1b	IDA		Rat	PMID:20575057|RGD:13702247
Cellular Component	GO:0005654	nucleoplasm	ANKS1B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	ANKS1B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0014069	postsynaptic density	Anks1b	IDA		Rat	PMID:20575057|RGD:13702247
Cellular Component	GO:0099092	postsynaptic density, intracellular component	Anks1b	IDA		Rat	PMID:20575057|RGD:13702247
Cellular Component	GO:0099523	presynaptic cytosol	Anks1b	IDA		Rat	PMID:20575057|RGD:13702247
Cellular Component	GO:0098685	Schaffer collateral - CA1 synapse	Anks1b	IDA		Mouse	PMID:26085624
Cellular Component	GO:0098685	Schaffer collateral - CA1 synapse	Anks1b	IEP		Mouse	PMID:26085624
Cellular Component	GO:0098685	Schaffer collateral - CA1 synapse	Anks1b	IMP		Mouse	PMID:26085624
Biological Process	GO:0099565	chemical synaptic transmission, postsynaptic	Anks1b	IDA		Mouse	PMID:26085624
Biological Process	GO:0099565	chemical synaptic transmission, postsynaptic	Anks1b	IEP		Mouse	PMID:26085624
Biological Process	GO:0099565	chemical synaptic transmission, postsynaptic	Anks1b	IMP		Mouse	PMID:26085624
Biological Process	GO:0099527	postsynapse to nucleus signaling pathway	Anks1b	EXP		Rat	PMID:17334360|RGD:13702197
Biological Process	GO:0099527	postsynapse to nucleus signaling pathway	Anks1b	IDA		Rat	PMID:17334360|RGD:13702197
Biological Process	GO:0099527	postsynapse to nucleus signaling pathway	Anks1b	IEP		Rat	PMID:17334360|RGD:13702197
Biological Process	GO:0099527	postsynapse to nucleus signaling pathway	Anks1b	IMP		Rat	PMID:17334360|RGD:13702197
Biological Process	GO:0097120	receptor localization to synapse	Anks1b	IMP		Rat	PMID:26085624|RGD:10402037
Biological Process	GO:1900383	regulation of synaptic plasticity by receptor localization to synapse	Anks1b	IMP		Mouse	PMID:26085624

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern