Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes APOD
  • Mouse genes Apod
  • Rat genes Apod
  • Zfish genes apoda.1,apoda.2,apodb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Apod

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0015485	cholesterol binding	APOD	IDA		Human	PMID:9278274
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:A8KA83	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:O43889-2	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q9P0L0	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:O43889-2	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:O14880	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:O15342	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:O15529	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:O15552	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:O43315	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:O75783	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:O95471	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:P11912	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:P19397	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:P25090	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:P34910-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:P43628	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:P48051	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:P48165	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q13113	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q13323	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q3KNW5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q49AM1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q4KMG9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q5JX71	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q5T7V8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q6IBW4-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q7Z7G2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q8IUN9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q8N6K0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q8N7X8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q8TB36	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q8TDV0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q8TED1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q96B21	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q96BA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q96BI3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q96Q45-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q99437	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q9BSE2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q9BXK5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q9GZY8-5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q9H2K0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q9H7M9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q9NQQ7-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q9NVV5-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q9P0L0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q9Y282	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:Q9Y680	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	APOD	IPI	UniProtKB:P02652	Human	PMID:7918467
Cellular Component	GO:0005737	cytoplasm	Apod	IDA		Rat	PMID:14551159|RGD:8554538
Cellular Component	GO:0022626	cytosolic ribosome	Apod	IDA		Rat	PMID:10218791|RGD:2311208
Cellular Component	GO:0030425	dendrite	Apod	IDA		Rat	PMID:10218791|RGD:2311208
Cellular Component	GO:0005783	endoplasmic reticulum	Apod	IDA		Rat	PMID:10218791|RGD:2311208
Cellular Component	GO:0070062	extracellular exosome	APOD	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	APOD	HDA		Human	PMID:23533145
Cellular Component	GO:0005576	extracellular region	APOD	HDA		Human	PMID:27068509
Cellular Component	GO:0005615	extracellular space	APOD	HDA		Human	PMID:16502470
Cellular Component	GO:0005615	extracellular space	APOD	HDA		Human	PMID:20551380
Cellular Component	GO:0005615	extracellular space	APOD	IDA		Human	PMID:21705670
Cellular Component	GO:0005622	intracellular anatomical structure	Apod	IDA		Mouse	PMID:11744388
Cellular Component	GO:0043025	neuronal cell body	Apod	IDA		Rat	PMID:10218791|RGD:2311208
Cellular Component	GO:0048471	perinuclear region of cytoplasm	APOD	IDA		Human	PMID:14551159
Biological Process	GO:0007568	aging	Apod	IEP		Rat	PMID:19189975|RGD:2311181
Biological Process	GO:0007420	brain development	Apod	IEP		Rat	PMID:10218791|RGD:2311208
Biological Process	GO:0006006	glucose metabolic process	APOD	IDA		Human	PMID:19176353
Biological Process	GO:0006629	lipid metabolic process	APOD	IDA		Human	PMID:19176353
Biological Process	GO:1900016	negative regulation of cytokine production involved in inflammatory response	APOD	IDA		Human	PMID:18842892
Biological Process	GO:0051895	negative regulation of focal adhesion assembly	APOD	IMP		Human	PMID:21705670
Biological Process	GO:0060588	negative regulation of lipoprotein lipid oxidation	APOD	IDA		Human	PMID:18419796
Biological Process	GO:0060588	negative regulation of lipoprotein lipid oxidation	Apod	IMP		Mouse	MGI:MGI:3829114|PMID:18419796
Biological Process	GO:0071638	negative regulation of monocyte chemotactic protein-1 production	APOD	IDA		Human	PMID:18842892
Biological Process	GO:0010642	negative regulation of platelet-derived growth factor receptor signaling pathway	APOD	IDA		Human	PMID:14551159
Biological Process	GO:0042308	negative regulation of protein import into nucleus	APOD	IDA		Human	PMID:14551159
Biological Process	GO:0048662	negative regulation of smooth muscle cell proliferation	APOD	IDA		Human	PMID:14551159
Biological Process	GO:2000098	negative regulation of smooth muscle cell-matrix adhesion	APOD	IMP		Human	PMID:21705670
Biological Process	GO:2000405	negative regulation of T cell migration	APOD	IDA		Human	PMID:18842892
Biological Process	GO:0014012	peripheral nervous system axon regeneration	Apod	IEP		Rat	PMID:2120218|RGD:2311210
Biological Process	GO:0048678	response to axon injury	Apod	IEP		Rat	PMID:2120218|RGD:2311210
Biological Process	GO:0000302	response to reactive oxygen species	APOD	IDA		Human	PMID:18419796
Biological Process	GO:0000302	response to reactive oxygen species	Apod	IMP		Mouse	MGI:MGI:3829114|PMID:18419796
Biological Process	GO:0009410	response to xenobiotic stimulus	Apod	IEP		Rat	PMID:12911617|RGD:2311190
Biological Process	GO:0042246	tissue regeneration	Apod	IEP		Rat	PMID:1695148|RGD:634662

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern