Comparative GO Graph (mouse, human, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ARID5B
  • Mouse genes Arid5b
  • Rat genes
  • Zfish genes arid5b,zgc:77151
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Arid5b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	ARID5B	IDA		Human	PMID:10329386
Molecular Function	GO:0005515	protein binding	ARID5B	IPI	UniProtKB:O75151	Human	PMID:21532585
Molecular Function	GO:0005515	protein binding	ARID5B	IPI	UniProtKB:Q13547	Human	PMID:23752268
Molecular Function	GO:0005515	protein binding	ARID5B	IPI	UniProtKB:Q13547	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	ARID5B	IPI	UniProtKB:Q13547	Human	PMID:28514442
Molecular Function	GO:0000976	transcription cis-regulatory region binding	ARID5B	IDA		Human	PMID:21532585
Molecular Function	GO:0003713	transcription coactivator activity	ARID5B	IDA		Human	PMID:21532585
Biological Process	GO:0060612	adipose tissue development	Arid5b	IMP		Mouse	MGI:MGI:5009387|PMID:18070594
Biological Process	GO:0030325	adrenal gland development	Arid5b	IMP	MGI:MGI:2445941	Mouse	PMID:11483573
Biological Process	GO:0048468	cell development	Arid5b	IMP		Mouse	PMID:17962384
Biological Process	GO:1990830	cellular response to leukemia inhibitory factor	Arid5b	IEP		Mouse	PMID:20439489
Biological Process	GO:0060325	face morphogenesis	Arid5b	IMP	MGI:MGI:3526852	Mouse	PMID:17143286
Biological Process	GO:0045444	fat cell differentiation	Arid5b	IMP		Mouse	PMID:17962384
Biological Process	GO:0060613	fat pad development	Arid5b	IMP	MGI:MGI:3771593	Mouse	PMID:14651970
Biological Process	GO:0008585	female gonad development	Arid5b	IMP	MGI:MGI:2445941	Mouse	PMID:11483573
Biological Process	GO:0010761	fibroblast migration	Arid5b	IMP	MGI:MGI:3526852	Mouse	PMID:17143286
Biological Process	GO:0001822	kidney development	Arid5b	IMP	MGI:MGI:3526852	Mouse	PMID:17143286
Biological Process	GO:0008584	male gonad development	Arid5b	IMP	MGI:MGI:2445941	Mouse	PMID:11483573
Biological Process	GO:0035264	multicellular organism growth	Arid5b	IMP	MGI:MGI:3526852	Mouse	PMID:17143286
Biological Process	GO:0048644	muscle organ morphogenesis	Arid5b	IMP	MGI:MGI:3526852	Mouse	PMID:17143286
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	ARID5B	IDA		Human	PMID:8649988
Biological Process	GO:0006807	nitrogen compound metabolic process	Arid5b	IMP	MGI:MGI:3526852	Mouse	PMID:17143286
Biological Process	GO:0048008	platelet-derived growth factor receptor signaling pathway	Arid5b	IMP	MGI:MGI:3526852	Mouse	PMID:17143286
Biological Process	GO:0051091	positive regulation of DNA-binding transcription factor activity	ARID5B	IDA		Human	PMID:21532585
Biological Process	GO:0051091	positive regulation of DNA-binding transcription factor activity	Arid5b	IMP		Mouse	PMID:17962384
Biological Process	GO:0009791	post-embryonic development	Arid5b	IMP	MGI:MGI:3526852	Mouse	PMID:17143286
Biological Process	GO:0060021	roof of mouth development	Arid5b	IMP	MGI:MGI:3526852	Mouse	PMID:17143286
Biological Process	GO:0048705	skeletal system morphogenesis	Arid5b	IMP	MGI:MGI:3526852	Mouse	PMID:17143286

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern