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Comparative GO Graph (mouse, human, rat, zebrafish)
Source
Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Ascl1

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

Molecular Function


Cellular Component


Biological Process



Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ascl1
Category ID Classification term Gene Evidence Inferred from Organism Reference
Molecular FunctionGO:0043425bHLH transcription factor bindingASCL1IPIUniProtKB:P15884HumanPMID:10903890
Molecular FunctionGO:0043425bHLH transcription factor bindingASCL1IPIUniProtKB:P15923HumanPMID:11940670
Molecular FunctionGO:0003682chromatin bindingAscl1IDAMousePMID:23639443
Molecular FunctionGO:0003700DNA-binding transcription factor activityASCL1IDAHumanPMID:10903890
Molecular FunctionGO:0003700DNA-binding transcription factor activityAscl1IDAMouseMGI:MGI:5897542|PMID:24243019
Molecular FunctionGO:0003700DNA-binding transcription factor activityAscl1IDAMousePMID:17141158
Molecular FunctionGO:0000981DNA-binding transcription factor activity, RNA polymerase II-specificascl1aIPIZFIN:ZDB-GENE-040426-780ZfishPMID:30606747
Molecular FunctionGO:0001227DNA-binding transcription repressor activity, RNA polymerase II-specificASCL1IDAHumanPMID:11736660
Molecular FunctionGO:0003690double-stranded DNA bindingAscl1IDARatPMID:9521744|RGD:2314148
Molecular FunctionGO:0070888E-box bindingASCL1IDAHumanPMID:10903890
Molecular FunctionGO:0070888E-box bindingASCL1IDAHumanPMID:11736660
Molecular FunctionGO:0042802identical protein bindingAscl1IPIRGD:71010RatPMID:9521744|RGD:2314148
Molecular FunctionGO:0003676nucleic acid bindingASCL1EXPHumanPMID:28402879
Molecular FunctionGO:0005515protein bindingASCL1IPIUniProtKB:P15884HumanPMID:10903890
Molecular FunctionGO:0005515protein bindingASCL1IPIUniProtKB:P15923HumanPMID:10903890
Molecular FunctionGO:0005515protein bindingASCL1IPIUniProtKB:A0A024R8A9HumanPMID:32296183
Molecular FunctionGO:0005515protein bindingASCL1IPIUniProtKB:Q9UHD9HumanPMID:32296183
Molecular FunctionGO:0005515protein bindingASCL1IPIUniProtKB:Q9UMX0HumanPMID:32296183
Molecular FunctionGO:0005515protein bindingAscl1IPIPR:E9PZZ1MousePMID:23639443
Molecular FunctionGO:0000978RNA polymerase II cis-regulatory region sequence-specific DNA bindingASCL1IDAHumanPMID:11736660
Molecular FunctionGO:0043565sequence-specific DNA bindingAscl1IDAMousePMID:17141158
Molecular FunctionGO:0043565sequence-specific DNA bindingascl1aIPIZFIN:ZDB-GENE-040426-1810ZfishPMID:23000964
Molecular FunctionGO:1990837sequence-specific double-stranded DNA bindingASCL1IDAHumanPMID:28473536
Cellular ComponentGO:0043025neuronal cell bodyAscl1IDAMousePMID:15065125
Cellular ComponentGO:0043025neuronal cell bodyAscl1IDAMousePMID:11133151
Cellular ComponentGO:0005634nucleusASCL1IDAHumanPMID:12858003
Cellular ComponentGO:0005634nucleusASCL1IDAHumanPMID:17507989
Cellular ComponentGO:0005634nucleusASCL1IDAHumanPMID:18311112
Cellular ComponentGO:0005634nucleusAscl1IDAMousePMID:12397111
Cellular ComponentGO:0005634nucleusAscl1IDAMousePMID:10952889
Cellular ComponentGO:0005634nucleusAscl1IDAMousePMID:19796622
Cellular ComponentGO:0005634nucleusAscl1IDAMousePMID:1576967
Biological ProcessGO:0021984adenohypophysis developmentascl1aIMPZfishPMID:16481349|ZFIN:ZDB-PUB-060227-5
Biological ProcessGO:0021984adenohypophysis developmentascl1aIMPZFIN:ZDB-GENO-040716-9ZfishPMID:16481349
Biological ProcessGO:0061104adrenal chromaffin cell differentiationAscl1IMPMGI:MGI:1857470MousePMID:12361965
Biological ProcessGO:0031103axon regenerationascl1aIMPZFIN:ZDB-MRPHLNO-050301-4ZfishPMID:25751153
Biological ProcessGO:0007420brain developmentascl1bIEPZfishPMID:12524185
Biological ProcessGO:0061103carotid body glomus cell differentiationAscl1IMPMGI:MGI:1857470MousePMID:15878769
Biological ProcessGO:0043697cell dedifferentiationascl1aIGIZFIN:ZDB-GENE-040426-1810,ZFIN:ZDB-GENE-990708-5ZfishPMID:23000964
Biological ProcessGO:0048469cell maturationAscl1IMPMGI:MGI:1857470MousePMID:16766700
Biological ProcessGO:0071259cellular response to magnetismAscl1IEPRatPMID:19382241|RGD:2311599
Biological ProcessGO:0021954central nervous system neuron developmentAscl1IMPMGI:MGI:1857470MousePMID:16469766
Biological ProcessGO:0021954central nervous system neuron developmentAscl1IGIMGI:MGI:109619MousePMID:15169849
Biological ProcessGO:0021987cerebral cortex developmentAscl1IMPMGI:MGI:1857470MousePMID:17678855
Biological ProcessGO:0021892cerebral cortex GABAergic interneuron differentiationASCL1IEPHumanPMID:12050665
Biological ProcessGO:0043009chordate embryonic developmentascl1bIEPZfishPMID:12524185
Biological ProcessGO:0021902commitment of neuronal cell to specific neuron type in forebrainAscl1IMPMGI:MGI:1857470MousePMID:22991444
Biological ProcessGO:0048566embryonic digestive tract developmentascl1aIMPZFIN:ZDB-GENO-120824-4ZfishPMID:23352790
Biological ProcessGO:0031018endocrine pancreas developmentascl1bIMPZFIN:ZDB-MRPHLNO-050308-14,ZFIN:ZDB-MRPHLNO-140811-4ZfishPMID:23835295
Biological ProcessGO:0031018endocrine pancreas developmentascl1bIMPZFIN:ZDB-MRPHLNO-050308-14ZfishPMID:23835295
Biological ProcessGO:0002070epithelial cell maturationascl1aIMPZFIN:ZDB-GENO-040716-9ZfishPMID:16481349
Biological ProcessGO:0021879forebrain neuron differentiationAscl1IDARatPMID:17936272|RGD:2314144
Biological ProcessGO:0097154GABAergic neuron differentiationAscl1IGIMGI:MGI:3040955MousePMID:15071116
Biological ProcessGO:0048699generation of neuronsAscl1IMPMGI:MGI:3639318MousePMID:23616538
Biological ProcessGO:0007507heart developmentAscl1IEPRatPMID:11803116|RGD:704410
Biological ProcessGO:0021575hindbrain morphogenesisascl1aIGIZFIN:ZDB-GENE-980526-174ZfishPMID:15659486|ZFIN:ZDB-PUB-050125-4
Biological ProcessGO:0021575hindbrain morphogenesisascl1bIGIZFIN:ZDB-GENE-990415-174ZfishPMID:15659486|ZFIN:ZDB-PUB-050125-4
Biological ProcessGO:0021575hindbrain morphogenesisascl1bIGIZFIN:ZDB-GENE-980526-90ZfishPMID:15659486|ZFIN:ZDB-PUB-050125-4
Biological ProcessGO:0021575hindbrain morphogenesisascl1aIMPZfishPMID:15659486|ZFIN:ZDB-PUB-050125-4
Biological ProcessGO:0021575hindbrain morphogenesisascl1bIMPZfishPMID:15659486|ZFIN:ZDB-PUB-050125-4
Biological ProcessGO:0060575intestinal epithelial cell differentiationascl1aIMPZFIN:ZDB-GENO-120824-4ZfishPMID:23353550
Biological ProcessGO:0061100lung neuroendocrine cell differentiationAscl1IMPMGI:MGI:1857470MousePMID:9126746
Biological ProcessGO:0097475motor neuron migrationAscl1IGIMGI:MGI:108055MousePMID:15976074
Biological ProcessGO:0097475motor neuron migrationAscl1IMPMGI:MGI:1857470MousePMID:15976074
Biological ProcessGO:0050883musculoskeletal movement, spinal reflex actionAscl1IMPMGI:MGI:3639318MousePMID:23616538
Biological ProcessGO:0043066negative regulation of apoptotic processASCL1IMPHumanPMID:17507989
Biological ProcessGO:0045892negative regulation of DNA-templated transcriptionASCL1IDAHumanPMID:11736660
Biological ProcessGO:0010629negative regulation of gene expressionascl1aIMPZFIN:ZDB-MRPHLNO-050301-3ZfishPMID:21911394
Biological ProcessGO:0010629negative regulation of gene expressionascl1aIMPZFIN:ZDB-MRPHLNO-050301-4ZfishPMID:21911394
Biological ProcessGO:0045665negative regulation of neuron differentiationASCL1IDAHumanPMID:12000752
Biological ProcessGO:0045665negative regulation of neuron differentiationAscl1IDARatPMID:17936272|RGD:2314144
Biological ProcessGO:0000122negative regulation of transcription by RNA polymerase IIASCL1IDAHumanPMID:11736660
Biological ProcessGO:0007399nervous system developmentAscl1IDAMouseMGI:MGI:5897542|PMID:24243019
Biological ProcessGO:0007399nervous system developmentAscl1IDARatPMID:11923194|RGD:727258
Biological ProcessGO:0007399nervous system developmentascl1aIMPZfishPMID:12702659
Biological ProcessGO:0007399nervous system developmentascl1aIGIZFIN:ZDB-GENE-990415-174ZfishPMID:12702659
Biological ProcessGO:0061351neural precursor cell proliferationAscl1IMPMGI:MGI:1857470MousePMID:21536733
Biological ProcessGO:0007400neuroblast fate determinationAscl1IMPMGI:MGI:1857470MousePMID:11032813
Biological ProcessGO:0007400neuroblast fate determinationAscl1IMPMGI:MGI:1857470MousePMID:12397111
Biological ProcessGO:0007405neuroblast proliferationAscl1IGIMGI:MGI:108055MousePMID:15976074
Biological ProcessGO:0061101neuroendocrine cell differentiationAscl1IMPMGI:MGI:1857470MousePMID:10952889
Biological ProcessGO:0022008neurogenesisASCL1IDAHumanPMID:19008346
Biological ProcessGO:0048666neuron developmentAscl1IDAMouseMGI:MGI:5897542|PMID:24243019
Biological ProcessGO:0048666neuron developmentAscl1IMPMGI:MGI:1857470MousePMID:9108377
Biological ProcessGO:0030182neuron differentiationAscl1IDAMouseMGI:MGI:5897542|PMID:24243019
Biological ProcessGO:0030182neuron differentiationAscl1IMPMGI:MGI:1857470MousePMID:16469766
Biological ProcessGO:0030182neuron differentiationAscl1IMPMGI:MGI:1857470MousePMID:15133515
Biological ProcessGO:0030182neuron differentiationAscl1IDAMousePMID:18184563
Biological ProcessGO:0048663neuron fate commitmentAscl1IDAMouseMGI:MGI:5897542|PMID:24243019
Biological ProcessGO:0048663neuron fate commitmentAscl1IGIMGI:MGI:2151057MousePMID:16020526
Biological ProcessGO:0048663neuron fate commitmentAscl1IMPMGI:MGI:1857470MousePMID:16715081
Biological ProcessGO:0048663neuron fate commitmentAscl1IMPMGI:MGI:1857470MousePMID:19191219
Biological ProcessGO:0048663neuron fate commitmentAscl1IMPMGI:MGI:1857470MousePMID:12629181
Biological ProcessGO:0048665neuron fate specificationAscl1IDAMouseMGI:MGI:5897542|PMID:24243019
Biological ProcessGO:0048665neuron fate specificationAscl1IMPMGI:MGI:1857470MousePMID:16469766
Biological ProcessGO:0003358noradrenergic neuron developmentAscl1IMPMouseMGI:MGI:3772428|PMID:18094025
Biological ProcessGO:0003359noradrenergic neuron fate commitmentASCL1IMPHumanPMID:14532329
Biological ProcessGO:0007219Notch signaling pathwayASCL1IDAHumanPMID:16160079
Biological ProcessGO:0007219Notch signaling pathwayAscl1IGIMGI:MGI:108055MousePMID:15976074
Biological ProcessGO:0007219Notch signaling pathwayAscl1IMPMGI:MGI:1857470MousePMID:11073877
Biological ProcessGO:0060166olfactory pit developmentAscl1IMPMGI:MGI:1857470MousePMID:9108377
Biological ProcessGO:0021779oligodendrocyte cell fate commitmentAscl1IMPMGI:MGI:1857470MousePMID:17678855
Biological ProcessGO:0014003oligodendrocyte developmentAscl1IMPMGI:MGI:1857470MousePMID:18287202
Biological ProcessGO:0048709oligodendrocyte differentiationAscl1IMPMGI:MGI:1857470MousePMID:18287202
Biological ProcessGO:0048709oligodendrocyte differentiationAscl1IGIMGI:MGI:108055MousePMID:15976074
Biological ProcessGO:0007389pattern specification processAscl1IMPMGI:MGI:1857470MousePMID:15930101
Biological ProcessGO:0048935peripheral nervous system neuron developmentAscl1IMPMGI:MGI:1857470MousePMID:8845150
Biological ProcessGO:0045787positive regulation of cell cycleAscl1IDAMousePMID:21536733
Biological ProcessGO:0045893positive regulation of DNA-templated transcriptionascl1aIDAZfishPMID:23000964
Biological ProcessGO:2000179positive regulation of neural precursor cell proliferationAscl1IMPMGI:MGI:1857470MousePMID:21536733
Biological ProcessGO:0050769positive regulation of neurogenesisAscl1IMPMGI:MGI:1857470MousePMID:16469766
Biological ProcessGO:0043525positive regulation of neuron apoptotic processAscl1IMPMGI:MGI:1857470MousePMID:16469766
Biological ProcessGO:0045666positive regulation of neuron differentiationAscl1IDARatPMID:10648228|RGD:13673741
Biological ProcessGO:0045666positive regulation of neuron differentiationAscl1IDARatPMID:17936272|RGD:2314144
Biological ProcessGO:0045747positive regulation of Notch signaling pathwayAscl1IMPMGI:MGI:1857470MousePMID:11073877
Biological ProcessGO:0045944positive regulation of transcription by RNA polymerase IIASCL1IDAHumanPMID:10903890
Biological ProcessGO:0045944positive regulation of transcription by RNA polymerase IIAscl1IGIMGI:MGI:99532MousePMID:8900141
Biological ProcessGO:0045944positive regulation of transcription by RNA polymerase IIAscl1IGIMGI:MGI:99458MousePMID:8900141
Biological ProcessGO:0045944positive regulation of transcription by RNA polymerase IIAscl1IGIMGI:MGI:101895MousePMID:17141158
Biological ProcessGO:0045944positive regulation of transcription by RNA polymerase IIAscl1IGIMGI:MGI:99533MousePMID:8900141
Biological ProcessGO:0045944positive regulation of transcription by RNA polymerase IIAscl1IDAMousePMID:23434913
Biological ProcessGO:0045944positive regulation of transcription by RNA polymerase IIAscl1IDAMousePMID:17141158
Biological ProcessGO:0045944positive regulation of transcription by RNA polymerase IIAscl1IGIMGI:MGI:102564MousePMID:17141158
Biological ProcessGO:0045944positive regulation of transcription by RNA polymerase IIAscl1IGIMGI:MGI:98510MousePMID:8900141
Biological ProcessGO:0045944positive regulation of transcription by RNA polymerase IIAscl1IGIMGI:MGI:2448528MousePMID:23639443
Biological ProcessGO:0031099regenerationascl1aIMPZFIN:ZDB-MRPHLNO-050301-3ZfishPMID:20935637
Biological ProcessGO:0031099regenerationascl1aIGIZFIN:ZDB-MRPHLNO-050301-3,ZFIN:ZDB-MRPHLNO-110913-1ZfishPMID:20935637
Biological ProcessGO:0042127regulation of cell population proliferationAscl1IDAMousePMID:19793887
Biological ProcessGO:0030856regulation of epithelial cell differentiationAscl1IMPMGI:MGI:3639318MousePMID:23284756
Biological ProcessGO:0010468regulation of gene expressionAscl1IMPMouseMGI:MGI:3772428|PMID:18094025
Biological ProcessGO:0010468regulation of gene expressionAscl1IMPMGI:MGI:1857470MousePMID:18287202
Biological ProcessGO:0010468regulation of gene expressionAscl1IMPMGI:MGI:2388165MousePMID:16469766
Biological ProcessGO:0010468regulation of gene expressionAscl1IMPMGI:MGI:1857470MousePMID:16469766
Biological ProcessGO:0007346regulation of mitotic cell cycleAscl1IMPMGI:MGI:1857470MousePMID:22991444
Biological ProcessGO:0050767regulation of neurogenesisAscl1IMPMGI:MGI:1857470MousePMID:20144606
Biological ProcessGO:0050767regulation of neurogenesisAscl1IMPMGI:MGI:1857470MousePMID:22991444
Biological ProcessGO:0008593regulation of Notch signaling pathwayAscl1IMPMGI:MGI:1857470MousePMID:19191219
Biological ProcessGO:0060165regulation of timing of subpallium neuron differentiationAscl1IMPMGI:MGI:1857470MousePMID:9876181
Biological ProcessGO:0006357regulation of transcription by RNA polymerase IIAscl1IDAMouseMGI:MGI:5897542|PMID:24243019
Biological ProcessGO:0006357regulation of transcription by RNA polymerase IIAscl1IDAMousePMID:19796622
Biological ProcessGO:0006357regulation of transcription by RNA polymerase IIascl1aIMPZfishPMID:30606747
Biological ProcessGO:0006357regulation of transcription by RNA polymerase IIascl1aIDAZfishPMID:30606747
Biological ProcessGO:0070849response to epidermal growth factorAscl1IEPRatPMID:9473334|RGD:2314149
Biological ProcessGO:0051593response to folic acidAscl1IEPRatPMID:19001765|RGD:2314143
Biological ProcessGO:0010226response to lithium ionAscl1IEPRatPMID:17263970|RGD:2314145
Biological ProcessGO:0032526response to retinoic acidASCL1IEPHumanPMID:12000752
Biological ProcessGO:0032526response to retinoic acidAscl1IEPRatPMID:11803116|RGD:704410
Biological ProcessGO:0070654sensory epithelium regenerationascl1aIGIZFIN:ZDB-GENE-040426-1810,ZFIN:ZDB-GENE-990708-5ZfishPMID:23000964
Biological ProcessGO:0070654sensory epithelium regenerationascl1aIEPZfishPMID:21911394
Biological ProcessGO:0021527spinal cord association neuron differentiationAscl1IMPMGI:MGI:1857470MousePMID:16715081
Biological ProcessGO:0021529spinal cord oligodendrocyte cell differentiationAscl1IGIMGI:MGI:97347MousePMID:18287202
Biological ProcessGO:0021529spinal cord oligodendrocyte cell differentiationAscl1IGIMGI:MGI:1355331MousePMID:18287202
Biological ProcessGO:0021530spinal cord oligodendrocyte cell fate specificationAscl1IMPMGI:MGI:1857470MousePMID:18287202
Biological ProcessGO:0061102stomach neuroendocrine cell differentiationAscl1IMPMGI:MGI:1857470MousePMID:18173746
Biological ProcessGO:0060163subpallium neuron fate commitmentAscl1IMPMGI:MGI:1857470MousePMID:9876181
Biological ProcessGO:0061549sympathetic ganglion developmentAscl1IMPMouseMGI:MGI:3772428|PMID:18094025
Biological ProcessGO:0061549sympathetic ganglion developmentascl1aIGIZFIN:ZDB-MRPHLNO-050308-13,ZFIN:ZDB-MRPHLNO-130820-9ZfishPMID:23754957
Biological ProcessGO:0061549sympathetic ganglion developmentascl1aIMPZFIN:ZDB-MRPHLNO-050308-13ZfishPMID:23754957
Biological ProcessGO:0061195taste bud formationascl1aIMPZFIN:ZDB-GENO-120824-4ZfishPMID:21791527
Biological ProcessGO:0042246tissue regenerationascl1aIDAZfishPMID:30606747
Biological ProcessGO:0042246tissue regenerationascl1aIMPZfishPMID:30606747
Biological ProcessGO:0060579ventral spinal cord interneuron fate commitmentAscl1IMPMouseMGI:MGI:3587461|PMID:16020526
Biological ProcessGO:0021750vestibular nucleus developmentAscl1IMPMGI:MGI:1857470MousePMID:12885554

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment
  IDA Inferred from direct assay
  IEP Inferred from expression pattern
  IGI Inferred from genetic interaction
  IMP Inferred from mutant phenotype
  IPI Inferred from physical interaction
  HTP Inferred from High Throughput Experiment
  HDA Inferred from High Throughput Direct Assay
  HMP Inferred from High Throughput Mutant Phenotype
  HGI Inferred from High Throughput Genetic Interaction
  HEP Inferred from High Throughput Expression Pattern

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
11/19/2024
MGI 6.24
The Jackson Laboratory