Comparative GO Graph (mouse, human)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ATF1
  • Mouse genes Atf1-ps
  • Rat genes
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Atf1-ps

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	ATF1	IDA		Human	PMID:1655749
Molecular Function	GO:0042802	identical protein binding	ATF1	IPI	UniProtKB:P18846	Human	PMID:20102225
Molecular Function	GO:0042802	identical protein binding	ATF1	IPI	UniProtKB:P18846	Human	PMID:21045134
Molecular Function	GO:0005515	protein binding	ATF1	IPI	UniProtKB:P03259-2	Human	PMID:10722738
Molecular Function	GO:0005515	protein binding	ATF1	IPI	UniProtKB:P0C746	Human	PMID:20102225
Molecular Function	GO:0005515	protein binding	ATF1	IPI	UniProtKB:P16220	Human	PMID:20102225
Molecular Function	GO:0005515	protein binding	ATF1	IPI	UniProtKB:Q16649	Human	PMID:20102225
Molecular Function	GO:0005515	protein binding	ATF1	IPI	UniProtKB:Q9DGW5	Human	PMID:20102225
Molecular Function	GO:0005515	protein binding	ATF1	IPI	UniProtKB:P03372	Human	PMID:21217774
Molecular Function	GO:0005515	protein binding	ATF1	IPI	UniProtKB:O95644	Human	PMID:25609649
Molecular Function	GO:0005515	protein binding	ATF1	IPI	UniProtKB:P05412	Human	PMID:25609649
Molecular Function	GO:0005515	protein binding	ATF1	IPI	UniProtKB:P16220	Human	PMID:25609649
Molecular Function	GO:0005515	protein binding	ATF1	IPI	UniProtKB:Q16649	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	ATF1	IPI	UniProtKB:A0A0C5B5G6	Human	PMID:29983246
Molecular Function	GO:0005515	protein binding	ATF1	IPI	UniProtKB:P03372	Human	PMID:31527615
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	ATF1	IDA		Human	PMID:1655749
Cellular Component	GO:1990590	ATF1-ATF4 transcription factor complex	ATF1	IDA		Human	PMID:12871976
Cellular Component	GO:0005654	nucleoplasm	ATF1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	ATF1	IDA		Human	PMID:8798441
Cellular Component	GO:0090575	RNA polymerase II transcription regulator complex	ATF1	IPI		Human	PMID:20102225
Biological Process	GO:0019933	cAMP-mediated signaling	ATF1	IDA		Human	PMID:25644539
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	ATF1	IDA		Human	PMID:1655749
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	ATF1	IDA		Human	PMID:1655749
Biological Process	GO:0014074	response to purine-containing compound	ATF1	IDA		Human	PMID:25644539

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern