Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ATF7IP
  • Mouse genes Atf7ip
  • Rat genes Atf7ip
  • Zfish genes atf7ip
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Atf7ip

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0016887	ATP hydrolysis activity	Atf7ip	IDA		Mouse	PMID:10777215
Molecular Function	GO:0005515	protein binding	ATF7IP	IPI	UniProtKB:P08047	Human	PMID:12665582
Molecular Function	GO:0005515	protein binding	ATF7IP	IPI	UniProtKB:Q9UIS9	Human	PMID:12665582
Molecular Function	GO:0005515	protein binding	ATF7IP	IPI	UniProtKB:Q9NRI5	Human	PMID:12812986
Molecular Function	GO:0005515	protein binding	ATF7IP	IPI	UniProtKB:Q9UHL9	Human	PMID:26275350
Molecular Function	GO:0005515	protein binding	ATF7IP	IPI	UniProtKB:Q15047	Human	PMID:27732843
Molecular Function	GO:0003714	transcription corepressor activity	Atf7ip	IDA		Mouse	PMID:10777215
Cellular Component	GO:0005829	cytosol	ATF7IP	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016604	nuclear body	ATF7IP	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	ATF7IP	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	ATF7IP	IDA		Human	PMID:12665582
Cellular Component	GO:0005634	nucleus	ATF7IP	IMP		Human	PMID:27732843
Cellular Component	GO:0005667	transcription regulator complex	Atf7ip	IDA		Mouse	PMID:10777215
Biological Process	GO:0006306	DNA methylation	ATF7IP	IDA		Human	PMID:12665582
Biological Process	GO:0006351	DNA-templated transcription	Atf7ip	IDA		Mouse	MGI:MGI:1355392|PMID:10777215
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	ATF7IP	IDA		Human	PMID:12665582
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Atf7ip	IDA		Mouse	MGI:MGI:1355392|PMID:10777215
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Atf7ip	IDA		Mouse	PMID:10777215
Biological Process	GO:0090309	positive regulation of DNA methylation-dependent heterochromatin formation	ATF7IP	IMP		Human	PMID:27732843
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	ATF7IP	IDA		Human	PMID:12665582
Biological Process	GO:0050821	protein stabilization	ATF7IP	IMP		Human	PMID:27732843
Biological Process	GO:0031647	regulation of protein stability	ATF7IP	IMP		Human	PMID:27732843
Biological Process	GO:0045898	regulation of RNA polymerase II transcription preinitiation complex assembly	ATF7IP	IDA		Human	PMID:12665582

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern