Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ATG13
  • Mouse genes Atg13
  • Rat genes Atg13
  • Zfish genes atg13
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Atg13

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:O75385	Human	PMID:19211835
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q8TDY2	Human	PMID:19211835
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:O75385	Human	PMID:19597335
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q8TDY2	Human	PMID:19597335
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q9BSB4	Human	PMID:19597335
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:O60238	Human	PMID:20200478
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q9Z2F7	Human	PMID:20200478
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:O75385	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:O95166	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:P60520	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q8TDY2	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q9BSB4	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q9BXW4	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q9GZQ8	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q9H0R8	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:P60520	Human	PMID:21900206
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:O75385	Human	PMID:23392225
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q8TDY2	Human	PMID:23392225
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q9BSB4	Human	PMID:23392225
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:O75385	Human	PMID:23524951
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:O95166	Human	PMID:24290141
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q9BSB4	Human	PMID:24290141
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q9BXW4	Human	PMID:24290141
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q9GZQ8	Human	PMID:24290141
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q9H492-1	Human	PMID:24290141
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:O75385	Human	PMID:25686248
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q9BSB4	Human	PMID:26299944
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q96LT7-1	Human	PMID:27334615
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q96LT7-2	Human	PMID:27334615
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q8TEV9	Human	PMID:28195531
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q96LT7-1	Human	PMID:29950492
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:O75385	Human	PMID:31806350
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q8TDY2	Human	PMID:31806350
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:O75385	Human	PMID:32707033
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:O75665	Human	PMID:33368531
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:Q8TDY2	Human	PMID:33368531
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:O75385	Human	PMID:33422265
Molecular Function	GO:0005515	protein binding	ATG13	IPI	UniProtKB:O75385	Human	PMID:33450483
Molecular Function	GO:0005515	protein binding	Atg13	IPI	UniProtKB:O70405|UniProtKB:Q9ESK9	Mouse	MGI:MGI:3849242|PMID:19258318
Molecular Function	GO:0005515	protein binding	Atg13	IPI	UniProtKB:Q9BSB4	Mouse	MGI:MGI:5919792|PMID:26030876
Molecular Function	GO:0019901	protein kinase binding	ATG13	IPI	UniProtKB:O75385	Human	PMID:18936157
Molecular Function	GO:0019901	protein kinase binding	ATG13	IPI	UniProtKB:Q8IYT8	Human	PMID:18936157
Molecular Function	GO:0019901	protein kinase binding	ATG13	IDA		Human	PMID:29487085
Cellular Component	GO:1990316	Atg1/ULK1 kinase complex	ATG13	IPI		Human	PMID:19597335
Cellular Component	GO:1990316	Atg1/ULK1 kinase complex	ATG13	IPI	UniProtKB:O75385	Human	PMID:19211835
Cellular Component	GO:1990316	Atg1/ULK1 kinase complex	ATG13	IPI	UniProtKB:Q8TDY2	Human	PMID:19211835
Cellular Component	GO:1990316	Atg1/ULK1 kinase complex	Atg13	IPI	UniProtKB:O70405|UniProtKB:Q9ESK9	Mouse	MGI:MGI:3849242|PMID:19258318
Cellular Component	GO:1990316	Atg1/ULK1 kinase complex	Atg13	IDA		Mouse	PMID:19211835
Cellular Component	GO:0005829	cytosol	Atg13	IDA		Mouse	MGI:MGI:3849242|PMID:19258318
Cellular Component	GO:0005739	mitochondrion	ATG13	IDA		Human	PMID:21855797
Cellular Component	GO:0000407	phagophore assembly site	ATG13	IDA		Human	PMID:19597335
Cellular Component	GO:0000407	phagophore assembly site	Atg13	IDA		Mouse	MGI:MGI:3849242|PMID:19258318
Cellular Component	GO:0000407	phagophore assembly site	Atg13	IDA		Mouse	MGI:MGI:4365321|PMID:19211835
Cellular Component	GO:0000407	phagophore assembly site	Atg13	IDA		Mouse	MGI:MGI:6810790|PMID:18936157
Biological Process	GO:0000045	autophagosome assembly	ATG13	IMP		Human	PMID:19211835
Biological Process	GO:0000045	autophagosome assembly	ATG13	IDA		Human	PMID:19225151
Biological Process	GO:0000045	autophagosome assembly	Atg13	IDA		Mouse	MGI:MGI:6810791|PMID:19225151
Biological Process	GO:0000045	autophagosome assembly	Atg13	IMP		Mouse	MGI:MGI:3849242|PMID:19258318
Biological Process	GO:0000423	mitophagy	Atg13	IMP		Mouse	MGI:MGI:5607224|PMID:21855797
Biological Process	GO:0008285	negative regulation of cell population proliferation	ATG13	IDA		Human	PMID:21795849
Biological Process	GO:0008285	negative regulation of cell population proliferation	Atg13	IDA		Mouse	MGI:MGI:6810792|PMID:21795849
Biological Process	GO:0010508	positive regulation of autophagy	ATG13	IDA		Human	PMID:29487085
Biological Process	GO:0010508	positive regulation of autophagy	Atg13	IDA		Mouse	MGI:MGI:6810791|PMID:19225151
Biological Process	GO:1903955	positive regulation of protein targeting to mitochondrion	ATG13	HMP		Human	PMID:24270810
Biological Process	GO:0046777	protein autophosphorylation	ATG13	IDA		Human	PMID:19225151
Biological Process	GO:0046777	protein autophosphorylation	Atg13	IDA		Mouse	MGI:MGI:5285135|PMID:21258367
Biological Process	GO:0006468	protein phosphorylation	ATG13	IDA		Human	PMID:19225151
Biological Process	GO:0006468	protein phosphorylation	Atg13	IDA		Mouse	MGI:MGI:6810791|PMID:19225151
Biological Process	GO:1903059	regulation of protein lipidation	ATG13	IDA		Human	PMID:19225151
Biological Process	GO:1903059	regulation of protein lipidation	Atg13	IDA		Mouse	MGI:MGI:6810791|PMID:19225151
Biological Process	GO:0098780	response to mitochondrial depolarisation	Atg13	IMP		Mouse	MGI:MGI:5607224|PMID:21855797

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern