Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ATG9A
  • Mouse genes Atg9a
  • Rat genes Atg9a
  • Zfish genes atg9a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Atg9a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0017128	phospholipid scramblase activity	ATG9A	IDA		Human	PMID:33106659
Molecular Function	GO:0017128	phospholipid scramblase activity	ATG9A	IDA		Human	PMID:33850023
Molecular Function	GO:0005515	protein binding	ATG9A	IPI	UniProtKB:Q8NEM7-2	Human	PMID:19893488
Molecular Function	GO:0005515	protein binding	ATG9A	IPI	UniProtKB:Q9UHD2	Human	PMID:21903422
Molecular Function	GO:0005515	protein binding	ATG9A	IPI	UniProtKB:Q92609	Human	PMID:24603492
Molecular Function	GO:0005515	protein binding	ATG9A	IPI	UniProtKB:Q96CW1	Human	PMID:24603492
Molecular Function	GO:0005515	protein binding	ATG9A	IPI	UniProtKB:P26371	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATG9A	IPI	UniProtKB:P60410	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATG9A	IPI	UniProtKB:Q04864	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATG9A	IPI	UniProtKB:Q05086-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATG9A	IPI	UniProtKB:Q15323	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATG9A	IPI	UniProtKB:Q17RB8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATG9A	IPI	UniProtKB:Q7Z3S9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATG9A	IPI	UniProtKB:Q9BYR5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ATG9A	IPI	UniProtKB:O00189	Human	PMID:29180427
Molecular Function	GO:0005515	protein binding	ATG9A	IPI	UniProtKB:Q2TAZ0	Human	PMID:31412244
Molecular Function	GO:0005515	protein binding	ATG9A	IPI	UniProtKB:Q96CW1	Human	PMID:33436498
Molecular Function	GO:0005515	protein binding	ATG9A	IPI	UniProtKB:Q96CW1	Human	PMID:34799561
Cellular Component	GO:0005776	autophagosome	Atg9a	IDA		Mouse	PMID:15755735
Cellular Component	GO:0005737	cytoplasm	Atg9a	IDA		Mouse	PMID:15755735
Cellular Component	GO:0005789	endoplasmic reticulum membrane	ATG9A	IDA		Human	PMID:27316455
Cellular Component	GO:0005789	endoplasmic reticulum membrane	ATG9A	IDA		Human	PMID:27663665
Cellular Component	GO:0005789	endoplasmic reticulum membrane	Atg9a	IDA		Mouse	MGI:MGI:6791812|PMID:27587839
Cellular Component	GO:0005768	endosome	ATG9A	IDA		Human	PMID:23093945
Cellular Component	GO:0005794	Golgi apparatus	ATG9A	IDA		Human	PMID:34432599
Cellular Component	GO:0000139	Golgi membrane	ATG9A	IDA		Human	PMID:27663665
Cellular Component	GO:0000139	Golgi membrane	Atg9a	IDA		Mouse	MGI:MGI:6791812|PMID:27587839
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	ATG9A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005770	late endosome	ATG9A	IDA		Human	PMID:22456507
Cellular Component	GO:0005770	late endosome	Atg9a	IDA		Rat	PMID:16940348|RGD:4889884
Cellular Component	GO:0016020	membrane	ATG9A	HDA		Human	PMID:19946888
Cellular Component	GO:0005739	mitochondrion	ATG9A	IDA		Human	PMID:34432599
Cellular Component	GO:0000407	phagophore assembly site	ATG9A	IDA		Human	PMID:22456507
Cellular Component	GO:0055037	recycling endosome	ATG9A	IDA		Human	PMID:22456507
Cellular Component	GO:0055038	recycling endosome membrane	ATG9A	IDA		Human	PMID:29437695
Cellular Component	GO:0008021	synaptic vesicle	Atg9a	EXP		Rat	PMID:23622064|RGD:13702180
Cellular Component	GO:0008021	synaptic vesicle	Atg9a	IDA		Rat	PMID:23622064|RGD:13702180
Cellular Component	GO:0005802	trans-Golgi network	ATG9A	IDA		Human	PMID:22456507
Cellular Component	GO:0005802	trans-Golgi network	ATG9A	IDA		Human	PMID:23093945
Cellular Component	GO:0005802	trans-Golgi network	ATG9A	IDA		Human	PMID:32073997
Cellular Component	GO:0005802	trans-Golgi network	ATG9A	IDA		Human	PMID:29180427
Biological Process	GO:0000045	autophagosome assembly	ATG9A	IMP		Human	PMID:15755735
Biological Process	GO:0000045	autophagosome assembly	ATG9A	IMP		Human	PMID:22456507
Biological Process	GO:0000045	autophagosome assembly	ATG9A	IMP		Human	PMID:29180427
Biological Process	GO:0000045	autophagosome assembly	ATG9A	IDA		Human	PMID:29437695
Biological Process	GO:0000045	autophagosome assembly	ATG9A	IDA		Human	PMID:32513819
Biological Process	GO:0000045	autophagosome assembly	ATG9A	IDA		Human	PMID:33468622
Biological Process	GO:0000045	autophagosome assembly	Atg9a	IMP	MGI:MGI:4417824	Mouse	PMID:22456507
Biological Process	GO:0000045	autophagosome assembly	Atg9a	IMP		Mouse	PMID:23402761
Biological Process	GO:0006914	autophagy	Atg9a	IMP		Mouse	MGI:MGI:6791812|PMID:27587839
Biological Process	GO:0006914	autophagy	Atg9a	IMP	MGI:MGI:4417824	Mouse	PMID:19926846
Biological Process	GO:0060349	bone morphogenesis	Atg9a	IMP		Mouse	MGI:MGI:5906103|PMID:27811852
Biological Process	GO:0045087	innate immune response	Atg9a	IMP	MGI:MGI:4417824	Mouse	PMID:19926846
Biological Process	GO:0032608	interferon-beta production	Atg9a	IMP		Mouse	PMID:24670807
Biological Process	GO:0010934	macrophage cytokine production	Atg9a	IMP		Mouse	PMID:24670807
Biological Process	GO:0032688	negative regulation of interferon-beta production	Atg9a	IMP		Mouse	PMID:24670807
Biological Process	GO:0010936	negative regulation of macrophage cytokine production	Atg9a	IMP		Mouse	PMID:24670807
Biological Process	GO:0010940	positive regulation of necrotic cell death	Atg9a	IMP		Mouse	MGI:MGI:5906103|PMID:27811852
Biological Process	GO:0034067	protein localization to Golgi apparatus	Atg9a	IMP	MGI:MGI:4417824	Mouse	PMID:19926846
Biological Process	GO:0031667	response to nutrient levels	Atg9a	IEP		Rat	PMID:17665967|RGD:1643198

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern