Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ATOH7
  • Mouse genes Atoh7
  • Rat genes Atoh7
  • Zfish genes atoh7
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Atoh7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	ATOH7	IPI	UniProtKB:P15923	Human	PMID:31696227
Molecular Function	GO:0005515	protein binding	ATOH7	IPI	UniProtKB:P15884-3	Human	PMID:32296183
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	ATOH7	IDA		Human	PMID:28473536
Molecular Function	GO:0000976	transcription cis-regulatory region binding	ATOH7	IDA		Human	PMID:31696227
Molecular Function	GO:0000976	transcription cis-regulatory region binding	Atoh7	IDA		Mouse	MGI:MGI:6727566|PMID:33712461
Cellular Component	GO:0030424	axon	Atoh7	IDA		Mouse	MGI:MGI:3776349|PMID:17977745
Cellular Component	GO:0005634	nucleus	ATOH7	IDA		Human	PMID:31696227
Cellular Component	GO:0005634	nucleus	Atoh7	IMP		Mouse	MGI:MGI:6727566|PMID:33712461
Cellular Component	GO:0043204	perikaryon	Atoh7	IDA		Mouse	MGI:MGI:3776349|PMID:17977745
Biological Process	GO:0043010	camera-type eye development	atoh7	IMP	ZFIN:ZDB-MRPHLNO-100405-2	Zfish	PMID:18653554
Biological Process	GO:0045165	cell fate commitment	atoh7	IMP	ZFIN:ZDB-GENO-980202-99	Zfish	PMID:11430806
Biological Process	GO:0007623	circadian rhythm	Atoh7	IMP	MGI:MGI:2159013	Mouse	PMID:12451142
Biological Process	GO:0009649	entrainment of circadian clock	Atoh7	IMP	MGI:MGI:2159013	Mouse	PMID:12451142
Biological Process	GO:0043153	entrainment of circadian clock by photoperiod	Atoh7	IMP		Mouse	MGI:MGI:5699646|PMID:26392540
Biological Process	GO:0001654	eye development	atoh7	IMP	ZFIN:ZDB-GENO-980202-99	Zfish	PMID:14973290
Biological Process	GO:0003407	neural retina development	ATOH7	IMP		Human	PMID:21441919
Biological Process	GO:0003407	neural retina development	Atoh7	IMP	MGI:MGI:2159015	Mouse	PMID:21441919
Biological Process	GO:0003407	neural retina development	atoh7	IMP	ZFIN:ZDB-MRPHLNO-100405-2	Zfish	PMID:23416047
Biological Process	GO:0021554	optic nerve development	ATOH7	IMP		Human	PMID:21441919
Biological Process	GO:0043473	pigmentation	atoh7	IMP	ZFIN:ZDB-GENO-980202-99	Zfish	PMID:9007256
Biological Process	GO:0050769	positive regulation of neurogenesis	atoh7	IMP	ZFIN:ZDB-MRPHLNO-100405-2	Zfish	PMID:18653554
Biological Process	GO:0050769	positive regulation of neurogenesis	atoh7	IMP	ZFIN:ZDB-GENO-980202-99	Zfish	PMID:11430806
Biological Process	GO:1902336	positive regulation of retinal ganglion cell axon guidance	Atoh7	IMP		Mouse	MGI:MGI:6727566|PMID:33712461
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	ATOH7	IMP		Human	PMID:31696227
Biological Process	GO:0051726	regulation of cell cycle	atoh7	IMP	ZFIN:ZDB-GENO-980202-99	Zfish	PMID:11430806
Biological Process	GO:0007346	regulation of mitotic cell cycle	atoh7	IMP	ZFIN:ZDB-GENO-181016-1	Zfish	PMID:29877567
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	Atoh7	IMP		Mouse	MGI:MGI:6727566|PMID:33712461
Biological Process	GO:0010996	response to auditory stimulus	Atoh7	IMP		Mouse	MGI:MGI:3776349|PMID:17977745
Biological Process	GO:0060041	retina development in camera-type eye	atoh7	IMP	ZFIN:ZDB-GENO-110112-1	Zfish	PMID:25655700
Biological Process	GO:0060041	retina development in camera-type eye	atoh7	IMP	ZFIN:ZDB-GENO-110112-1	Zfish	PMID:22103894
Biological Process	GO:0010842	retina layer formation	atoh7	IMP	ZFIN:ZDB-GENO-090608-3	Zfish	PMID:18805097
Biological Process	GO:0010842	retina layer formation	atoh7	IGI	ZFIN:ZDB-GENO-090608-5	Zfish	PMID:18805097
Biological Process	GO:0010842	retina layer formation	atoh7	IMP	ZFIN:ZDB-GENO-181016-1	Zfish	PMID:29877567
Biological Process	GO:0036269	swimming behavior	atoh7	IMP	ZFIN:ZDB-GENO-110112-1	Zfish	PMID:23781175

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern