Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ATP2B3
  • Mouse genes Atp2b3
  • Rat genes Atp2b3
  • Zfish genes atp2b3a,atp2b3b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Atp2b3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0015085	calcium ion transmembrane transporter activity	ATP2B3	IDA		Human	PMID:18029012
Molecular Function	GO:1905056	P-type calcium transporter activity involved in regulation of presynaptic cytosolic calcium ion concentration	ATP2B3	IDA		Human	PMID:18029012
Molecular Function	GO:1905056	P-type calcium transporter activity involved in regulation of presynaptic cytosolic calcium ion concentration	ATP2B3	IMP		Human	PMID:18029012
Molecular Function	GO:0030165	PDZ domain binding	Atp2b3	IPI	RGD:628725	Rat	PMID:16554037|RGD:1581788
Molecular Function	GO:0005515	protein binding	ATP2B3	IPI	UniProtKB:P62258	Human	PMID:18029012
Molecular Function	GO:0005515	protein binding	ATP2B3	IPI	UniProtKB:P63104	Human	PMID:18029012
Molecular Function	GO:0005515	protein binding	Atp2b3	IPI	UniProtKB:Q5EBL8-1	Rat	PMID:12763866|RGD:8553622
Cellular Component	GO:1903561	extracellular vesicle	ATP2B3	HDA		Human	PMID:24769233
Cellular Component	GO:0098982	GABA-ergic synapse	ATP2B3	IDA		Human	PMID:18029012
Cellular Component	GO:0098982	GABA-ergic synapse	ATP2B3	IMP		Human	PMID:18029012
Cellular Component	GO:0098978	glutamatergic synapse	ATP2B3	IDA		Human	PMID:18029012
Cellular Component	GO:0098978	glutamatergic synapse	ATP2B3	IMP		Human	PMID:18029012
Cellular Component	GO:0098978	glutamatergic synapse	Atp2b3	IDA		Rat	PMID:17183553|RGD:13702242
Cellular Component	GO:0045121	membrane raft	Atp2b3	IDA		Rat	PMID:17596212|RGD:2317728
Cellular Component	GO:1990032	parallel fiber	Atp2b3	IDA		Rat	PMID:17183553|RGD:13702242
Cellular Component	GO:0098688	parallel fiber to Purkinje cell synapse	Atp2b3	IDA		Rat	PMID:17183553|RGD:13702242
Cellular Component	GO:0005886	plasma membrane	ATP2B3	IDA		Human	PMID:18029012
Cellular Component	GO:0042734	presynaptic membrane	Atp2b3	IDA		Rat	PMID:17183553|RGD:13702242
Biological Process	GO:0007420	brain development	Atp2b3	IEP		Rat	PMID:1328526|RGD:2317749
Biological Process	GO:1990034	calcium ion export across plasma membrane	ATP2B3	IDA		Human	PMID:18029012
Biological Process	GO:1990034	calcium ion export across plasma membrane	ATP2B3	IDA		Human	PMID:22912398
Biological Process	GO:1990034	calcium ion export across plasma membrane	ATP2B3	IDA		Human	PMID:25953895
Biological Process	GO:0003407	neural retina development	Atp2b3	IEP		Rat	PMID:16079002|RGD:2317729
Biological Process	GO:0051480	regulation of cytosolic calcium ion concentration	ATP2B3	IDA		Human	PMID:18029012

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern