Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ATP9A
  • Mouse genes Atp9a
  • Rat genes Atp9a
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Atp9a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0002020	protease binding	ATP9A	IPI	UniProtKB:P49768	Human	PMID:26094765
Molecular Function	GO:0002020	protease binding	ATP9A	IPI	UniProtKB:Q92542	Human	PMID:26094765
Molecular Function	GO:0002020	protease binding	ATP9A	IPI	UniProtKB:Q96QE2	Human	PMID:26094765
Molecular Function	GO:0005515	protein binding	ATP9A	IPI	UniProtKB:Q9Y3R5	Human	PMID:30213940
Cellular Component	GO:0005769	early endosome	ATP9A	IDA		Human	PMID:21914794
Cellular Component	GO:0031901	early endosome membrane	ATP9A	IDA		Human	PMID:27733620
Cellular Component	GO:0031901	early endosome membrane	ATP9A	IDA		Human	PMID:30213940
Cellular Component	GO:0048471	perinuclear region of cytoplasm	ATP9A	IDA		Human	PMID:21914794
Cellular Component	GO:0005886	plasma membrane	ATP9A	IDA		Human	PMID:30947313
Cellular Component	GO:0055037	recycling endosome	ATP9A	IDA		Human	PMID:21914794
Cellular Component	GO:0055038	recycling endosome membrane	ATP9A	IDA		Human	PMID:27733620
Cellular Component	GO:0005802	trans-Golgi network	ATP9A	IDA		Human	PMID:21914794
Cellular Component	GO:0032588	trans-Golgi network membrane	ATP9A	IDA		Human	PMID:27733620
Cellular Component	GO:0032588	trans-Golgi network membrane	ATP9A	IDA		Human	PMID:30213940
Biological Process	GO:1903542	negative regulation of exosomal secretion	ATP9A	IMP		Human	PMID:30947313
Biological Process	GO:2001135	regulation of endocytic recycling	ATP9A	IMP		Human	PMID:27733620
Biological Process	GO:1905279	regulation of retrograde transport, endosome to Golgi	ATP9A	IMP		Human	PMID:30213940

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern