Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ATRN
  • Mouse genes Atrn
  • Rat genes Atrn
  • Zfish genes atrn
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Atrn

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Atrn	IPI	PR:Q03288	Mouse	PMID:11137996
Molecular Function	GO:0038023	signaling receptor activity	Atrn	IPI	PR:Q03288	Mouse	PMID:11137996
Cellular Component	GO:0005737	cytoplasm	Atrn	IDA		Rat	PMID:15354523|RGD:1626300
Cellular Component	GO:0070062	extracellular exosome	ATRN	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	ATRN	HDA		Human	PMID:23533145
Cellular Component	GO:0005615	extracellular space	ATRN	IDA		Human	PMID:17261078
Cellular Component	GO:0005886	plasma membrane	Atrn	IDA		Rat	PMID:15354523|RGD:1626300
Biological Process	GO:0021549	cerebellum development	Atrn	IMP	MGI:MGI:1856082	Mouse	PMID:18064672
Biological Process	GO:0042552	myelination	Atrn	IMP	MGI:MGI:1856082	Mouse	PMID:18064672
Biological Process	GO:0043473	pigmentation	Atrn	IMP	MGI:MGI:1856081	Mouse	MGI:MGI:48643
Biological Process	GO:0043473	pigmentation	Atrn	IMP	MGI:MGI:1856082	Mouse	PMID:18064672
Biological Process	GO:0043473	pigmentation	Atrn	IMP		Rat	PMID:11209055|RGD:67998
Biological Process	GO:0110020	regulation of actomyosin structure organization	atrn	IGI	ZFIN:ZDB-GENO-190604-14	Zfish	PMID:28924386
Biological Process	GO:0110020	regulation of actomyosin structure organization	atrn	IMP	ZFIN:ZDB-GENO-190604-8	Zfish	PMID:28924386
Biological Process	GO:0110020	regulation of actomyosin structure organization	atrn	IMP	ZFIN:ZDB-GENO-190604-7	Zfish	PMID:28924386
Biological Process	GO:0110020	regulation of actomyosin structure organization	atrn	IGI	ZFIN:ZDB-GENE-060526-275	Zfish	PMID:28924386
Biological Process	GO:0040014	regulation of multicellular organism growth	Atrn	IMP	MGI:MGI:1856082	Mouse	PMID:10086355
Biological Process	GO:0006979	response to oxidative stress	Atrn	IMP		Rat	PMID:12654511|RGD:1299185

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern