Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes B9D1
  • Mouse genes B9d1
  • Rat genes B9d1
  • Zfish genes b9d1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set B9d1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008158	hedgehog receptor activity	B9d1	IMP		Mouse	MGI:MGI:5298320|PMID:21763481
Molecular Function	GO:0005515	protein binding	B9D1	IPI	UniProtKB:Q9BPU9	Human	PMID:26638075
Molecular Function	GO:0005515	protein binding	B9D1	IPI	UniProtKB:Q9BPU9	Human	PMID:27173435
Molecular Function	GO:0005515	protein binding	B9D1	IPI	UniProtKB:Q9BPU9	Human	PMID:32726168
Molecular Function	GO:0005515	protein binding	B9d1	IPI	UniProtKB:Q3UK10|UniProtKB:Q5SW45	Mouse	MGI:MGI:5298320|PMID:21763481
Molecular Function	GO:0005515	protein binding	B9d1	IPI	UniProtKB:Q5SW45	Mouse	MGI:MGI:5013991|PMID:21565611
Molecular Function	GO:0005515	protein binding	B9d1	IPI	UniProtKB:Q3UK10	Mouse	MGI:MGI:5298320|PMID:21763481
Molecular Function	GO:0005515	protein binding	B9d1	IPI	PR:Q8K3E5	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	B9d1	IPI	PR:Q5SW45	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	B9d1	IPI	PR:Q8K0U3	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	B9d1	IPI	PR:Q3U284	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	B9d1	IPI	PR:Q8CFW7	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	B9d1	IPI	PR:Q8BZ64	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	B9d1	IPI	PR:Q922M3	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	B9d1	IPI	PR:Q2MV57	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	B9d1	IPI	PR:Q3UK10	Mouse	PMID:22179047
Cellular Component	GO:0005813	centrosome	B9D1	IDA		Human	PMID:19208769
Cellular Component	GO:0036064	ciliary basal body	B9D1	IDA		Human	PMID:19208769
Cellular Component	GO:0035869	ciliary transition zone	B9d1	IDA		Mouse	MGI:MGI:5300833|PMID:22179047
Cellular Component	GO:0016020	membrane	B9d1	IDA		Mouse	PMID:22179047
Cellular Component	GO:0036038	MKS complex	B9d1	IDA		Mouse	MGI:MGI:5288576|PMID:21725307
Cellular Component	GO:0036038	MKS complex	B9d1	IDA		Mouse	PMID:22179047
Biological Process	GO:0043010	camera-type eye development	B9d1	IMP	MGI:MGI:5301332	Mouse	PMID:22179047
Biological Process	GO:0060271	cilium assembly	B9d1	IMP		Mouse	MGI:MGI:5288576|PMID:21725307
Biological Process	GO:0060271	cilium assembly	B9d1	IMP	MGI:MGI:5301332	Mouse	PMID:22179047
Biological Process	GO:0042733	embryonic digit morphogenesis	B9d1	IMP	MGI:MGI:5301332	Mouse	PMID:22179047
Biological Process	GO:0001701	in utero embryonic development	B9d1	IMP	MGI:MGI:5301332	Mouse	PMID:22179047
Biological Process	GO:0060563	neuroepithelial cell differentiation	B9d1	IMP	MGI:MGI:5301332	Mouse	PMID:22179047
Biological Process	GO:0032880	regulation of protein localization	B9d1	IMP		Mouse	PMID:22179047
Biological Process	GO:0007224	smoothened signaling pathway	B9d1	IMP		Mouse	PMID:22179047
Biological Process	GO:0001944	vasculature development	B9d1	IMP	MGI:MGI:5301332	Mouse	PMID:22179047

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern