Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes B9D2
  • Mouse genes B9d2
  • Rat genes B9d2
  • Zfish genes b9d2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set B9d2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0043015	gamma-tubulin binding	B9d2	IDA		Mouse	MGI:MGI:3776988|PMID:18287022
Molecular Function	GO:0005515	protein binding	B9D2	IPI	UniProtKB:Q8N4P2	Human	PMID:21602787
Molecular Function	GO:0005515	protein binding	B9D2	IPI	UniProtKB:Q9Y283	Human	PMID:21602787
Molecular Function	GO:0005515	protein binding	B9D2	IPI	UniProtKB:Q9NXB0	Human	PMID:26638075
Molecular Function	GO:0005515	protein binding	B9D2	IPI	UniProtKB:Q9UPM9	Human	PMID:26638075
Molecular Function	GO:0005515	protein binding	B9D2	IPI	UniProtKB:Q9UPM9	Human	PMID:27173435
Molecular Function	GO:0005515	protein binding	B9D2	IPI	UniProtKB:O43711	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	B9D2	IPI	UniProtKB:P47897	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	B9D2	IPI	UniProtKB:Q6IQ23-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	B9D2	IPI	UniProtKB:Q7Z4N8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	B9D2	IPI	UniProtKB:Q7Z5V6-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	B9D2	IPI	UniProtKB:Q99932-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	B9D2	IPI	UniProtKB:Q9BRG1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	B9D2	IPI	UniProtKB:Q9BT30	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	B9D2	IPI	UniProtKB:Q9NXB0	Human	PMID:32726168
Molecular Function	GO:0005515	protein binding	B9D2	IPI	UniProtKB:Q9UPM9	Human	PMID:32726168
Molecular Function	GO:0005515	protein binding	B9d2	IPI	UniProtKB:Q5SW45|UniProtKB:Q9R1S0	Mouse	MGI:MGI:5298320|PMID:21763481
Molecular Function	GO:0005515	protein binding	B9d2	IPI	PR:Q8K3E5	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	B9d2	IPI	PR:Q8K0U3	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	B9d2	IPI	PR:Q8CFW7	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	B9d2	IPI	PR:Q8BZ64	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	B9d2	IPI	PR:Q2MV57	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	B9d2	IPI	PR:Q5SW45	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	B9d2	IPI	PR:Q9R1S0	Mouse	PMID:22179047
Molecular Function	GO:0005515	protein binding	B9d2	IPI	PR:Q3U284	Mouse	PMID:22179047
Cellular Component	GO:0005813	centrosome	B9D2	IDA		Human	PMID:19208769
Cellular Component	GO:0036064	ciliary basal body	B9D2	IDA		Human	PMID:19208769
Cellular Component	GO:0005929	cilium	b9d2	IDA		Zfish	PMID:21602787
Cellular Component	GO:0016020	membrane	B9d2	IDA		Mouse	PMID:22179047
Cellular Component	GO:0036038	MKS complex	B9d2	IDA		Mouse	PMID:22179047
Biological Process	GO:0060271	cilium assembly	B9d2	IMP		Mouse	MGI:MGI:3776988|PMID:18287022
Biological Process	GO:0060271	cilium assembly	b9d2	IMP		Zfish	PMID:21602787|ZFIN:ZDB-PUB-120323-3
Biological Process	GO:0060271	cilium assembly	b9d2	IGI	ZFIN:ZDB-MRPHLNO-080107-2,ZFIN:ZDB-MRPHLNO-120402-3	Zfish	PMID:21602787
Biological Process	GO:0060271	cilium assembly	b9d2	IGI	ZFIN:ZDB-GENO-130822-1,ZFIN:ZDB-MRPHLNO-120402-3	Zfish	PMID:21602787
Biological Process	GO:0001736	establishment of planar polarity	b9d2	IGI	ZFIN:ZDB-MRPHLNO-041217-5,ZFIN:ZDB-MRPHLNO-120402-3	Zfish	PMID:21602787
Biological Process	GO:0007163	establishment or maintenance of cell polarity	b9d2	IMP		Zfish	PMID:21602787|ZFIN:ZDB-PUB-120323-3
Biological Process	GO:0036372	opsin transport	b9d2	IMP		Zfish	PMID:21602787|ZFIN:ZDB-PUB-120323-3
Biological Process	GO:0036372	opsin transport	b9d2	IGI	ZFIN:ZDB-MRPHLNO-080107-2,ZFIN:ZDB-MRPHLNO-120402-3	Zfish	PMID:21602787
Biological Process	GO:0036372	opsin transport	b9d2	IMP	ZFIN:ZDB-MRPHLNO-120402-3	Zfish	PMID:21602787
Biological Process	GO:0036372	opsin transport	b9d2	IMP	ZFIN:ZDB-MRPHLNO-120402-4	Zfish	PMID:21602787
Biological Process	GO:0036372	opsin transport	b9d2	IGI	ZFIN:ZDB-MRPHLNO-080929-3,ZFIN:ZDB-MRPHLNO-120402-3	Zfish	PMID:21602787

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern