Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BANF1
  • Mouse genes Banf1
  • Rat genes Banf1
  • Zfish genes banf1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Banf1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	Banf1	IDA		Mouse	PMID:9465049
Molecular Function	GO:0003690	double-stranded DNA binding	BANF1	IDA		Human	PMID:28841419
Molecular Function	GO:0003690	double-stranded DNA binding	BANF1	IDA		Human	PMID:32792394
Molecular Function	GO:0042802	identical protein binding	BANF1	IPI	UniProtKB:O75531	Human	PMID:16155580
Molecular Function	GO:0042802	identical protein binding	Banf1	IPI	RGD:620662	Rat	PMID:15546916|RGD:10054038
Molecular Function	GO:0140678	molecular function inhibitor activity	BANF1	IDA		Human	PMID:32792394
Molecular Function	GO:0005515	protein binding	BANF1	IPI	UniProtKB:P50402	Human	PMID:12163176
Molecular Function	GO:0005515	protein binding	BANF1	IPI	UniProtKB:P02545	Human	PMID:22399800
Molecular Function	GO:0005515	protein binding	BANF1	IPI	UniProtKB:P50402	Human	PMID:22399800
Molecular Function	GO:0005515	protein binding	BANF1	IPI	UniProtKB:Q8NAG6	Human	PMID:22399800
Molecular Function	GO:0005515	protein binding	BANF1	IPI	UniProtKB:Q8NAG6-2	Human	PMID:22399800
Molecular Function	GO:0005515	protein binding	BANF1	IPI	UniProtKB:Q86XL3	Human	PMID:22770216
Molecular Function	GO:0005515	protein binding	BANF1	IPI	UniProtKB:P50402	Human	PMID:25502805
Molecular Function	GO:0005515	protein binding	BANF1	IPI	UniProtKB:P50402	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	BANF1	IPI	UniProtKB:P50402	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	BANF1	IDA		Human	PMID:31796734
Molecular Function	GO:0005515	protein binding	BANF1	IPI	UniProtKB:P09874	Human	PMID:31796734
Molecular Function	GO:0005515	protein binding	BANF1	IPI	UniProtKB:P50402	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BANF1	IPI	UniProtKB:Q9H503-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BANF1	IPI	UniProtKB:P50402	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Banf1	IPI	RGD:3875	Rat	PMID:15546916|RGD:10054038
Molecular Function	GO:0042803	protein homodimerization activity	BANF1	IPI	UniProtKB:O75531	Human	PMID:22399800
Cellular Component	GO:0000785	chromatin	BANF1	IDA		Human	PMID:31796734
Cellular Component	GO:0000793	condensed chromosome	BANF1	IDA		Human	PMID:28841419
Cellular Component	GO:0000793	condensed chromosome	Banf1	IDA		Rat	PMID:10393804|RGD:10054037
Cellular Component	GO:0005737	cytoplasm	BANF1	IDA		Human	PMID:18005698
Cellular Component	GO:0005737	cytoplasm	BANF1	IDA		Human	PMID:22194607
Cellular Component	GO:0005829	cytosol	BANF1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	BANF1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	BANF1	IDA		Human	PMID:18005698
Cellular Component	GO:0005634	nucleus	BANF1	HDA		Human	PMID:21630459
Cellular Component	GO:0005634	nucleus	BANF1	IDA		Human	PMID:22194607
Cellular Component	GO:0005634	nucleus	Banf1	IDA		Rat	PMID:10393804|RGD:10054037
Biological Process	GO:0006325	chromatin organization	BANF1	IDA		Human	PMID:28841419
Biological Process	GO:0015074	DNA integration	Banf1	IDA		Mouse	PMID:9465049
Biological Process	GO:0007084	mitotic nuclear membrane reassembly	BANF1	IDA		Human	PMID:28841419
Biological Process	GO:0045824	negative regulation of innate immune response	BANF1	IDA		Human	PMID:32792394
Biological Process	GO:0010836	negative regulation of protein ADP-ribosylation	BANF1	IDA		Human	PMID:31796734
Biological Process	GO:0032480	negative regulation of type I interferon production	BANF1	IDA		Human	PMID:32792394
Biological Process	GO:0045071	negative regulation of viral genome replication	BANF1	IDA		Human	PMID:18005698
Biological Process	GO:0006979	response to oxidative stress	BANF1	IDA		Human	PMID:31796734

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern