Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BARHL1
  • Mouse genes Barhl1
  • Rat genes Barhl1
  • Zfish genes barhl1a,barhl1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Barhl1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	Barhl1	IDA		Mouse	PMID:18212062
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	BARHL1	IDA		Human	PMID:28473536
Cellular Component	GO:0005634	nucleus	Barhl1	IDA		Mouse	PMID:18212062
Biological Process	GO:0030901	midbrain development	Barhl1	IMP	MGI:MGI:2181383	Mouse	PMID:16752387
Biological Process	GO:0043524	negative regulation of neuron apoptotic process	Barhl1	IMP	MGI:MGI:2181383	Mouse	PMID:16752387
Biological Process	GO:0043524	negative regulation of neuron apoptotic process	Barhl1	IMP	MGI:MGI:2181383	Mouse	PMID:12091321
Biological Process	GO:1905586	negative regulation of outer hair cell apoptotic process	Barhl1	IMP	MGI:MGI:2181383	Mouse	PMID:12091321
Biological Process	GO:0051402	neuron apoptotic process	Barhl1	IMP	MGI:MGI:2181383	Mouse	PMID:16752387
Biological Process	GO:0051402	neuron apoptotic process	Barhl1	IMP	MGI:MGI:2181383	Mouse	PMID:12091321
Biological Process	GO:0001764	neuron migration	Barhl1	IMP	MGI:MGI:2181383	Mouse	PMID:15044550
Biological Process	GO:1905584	outer hair cell apoptotic process	Barhl1	IMP	MGI:MGI:2181383	Mouse	PMID:12091321
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Barhl1	IDA		Mouse	PMID:18212062
Biological Process	GO:0007605	sensory perception of sound	Barhl1	IMP	MGI:MGI:2181383	Mouse	PMID:12091321

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern