Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BCAM
  • Mouse genes Bcam
  • Rat genes Bcam
  • Zfish genes bcam
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Bcam

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0043236	laminin binding	BCAM	IMP		Human	PMID:16236823
Molecular Function	GO:0005055	laminin receptor activity	BCAM	IMP		Human	PMID:16236823
Molecular Function	GO:0005055	laminin receptor activity	Bcam	IDA		Mouse	PMID:10630290
Molecular Function	GO:0005515	protein binding	BCAM	IDA		Human	PMID:24453976
Molecular Function	GO:0005515	protein binding	BCAM	IPI	UniProtKB:O95198	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	BCAM	IPI	UniProtKB:O95198	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	BCAM	IPI	UniProtKB:P0DPK4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BCAM	IPI	UniProtKB:Q07627	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BCAM	IPI	UniProtKB:Q8IUG1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BCAM	IPI	UniProtKB:Q99750	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BCAM	IPI	UniProtKB:Q9C029	Human	PMID:32296183
Cellular Component	GO:0009986	cell surface	Bcam	IDA		Mouse	PMID:11507772
Cellular Component	GO:0062023	collagen-containing extracellular matrix	BCAM	HDA		Human	PMID:27559042
Cellular Component	GO:0070062	extracellular exosome	BCAM	HDA		Human	PMID:19056867
Cellular Component	GO:0005576	extracellular region	BCAM	HDA		Human	PMID:27068509
Cellular Component	GO:0005886	plasma membrane	Bcam	IDA		Mouse	PMID:10630290
Biological Process	GO:0007155	cell adhesion	Bcam	IDA		Mouse	PMID:10630290
Biological Process	GO:0007160	cell-matrix adhesion	BCAM	IMP		Human	PMID:16236823

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern