Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BCAN
  • Mouse genes Bcan
  • Rat genes Bcan
  • Zfish genes bcan
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Bcan

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	BCAN	IPI	UniProtKB:P05067	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	BCAN	IPI	UniProtKB:P07948	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	BCAN	IPI	UniProtKB:P48730-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	BCAN	IPI	UniProtKB:Q06481-5	Human	PMID:32814053
Cellular Component	GO:0030424	axon	Bcan	IDA		Rat	PMID:17709431|RGD:14392774
Cellular Component	GO:0043194	axon initial segment	Bcan	IDA		Rat	PMID:17709431|RGD:14392774
Cellular Component	GO:0009986	cell surface	Bcan	IDA		Rat	PMID:12799382|RGD:14392782
Cellular Component	GO:0030425	dendrite	Bcan	IDA		Rat	PMID:7592978|RGD:1298697
Cellular Component	GO:0031012	extracellular matrix	Bcan	IDA		Mouse	PMID:19141078
Cellular Component	GO:0005615	extracellular space	Bcan	IDA		Rat	PMID:7592978|RGD:1298697
Cellular Component	GO:0098982	GABA-ergic synapse	Bcan	IDA		Rat	PMID:16503162|RGD:13702210
Cellular Component	GO:0098978	glutamatergic synapse	Bcan	IPI		Mouse	PMID:28712654
Cellular Component	GO:0098978	glutamatergic synapse	Bcan	IMP		Mouse	PMID:28712654
Cellular Component	GO:0098978	glutamatergic synapse	Bcan	IDA		Mouse	PMID:28712654
Cellular Component	GO:0098978	glutamatergic synapse	Bcan	IEP		Mouse	PMID:28712654
Cellular Component	GO:0098978	glutamatergic synapse	Bcan	IDA		Rat	PMID:16503162|RGD:13702210
Cellular Component	GO:0033268	node of Ranvier	Bcan	IDA		Rat	PMID:17709431|RGD:14392774
Cellular Component	GO:0072534	perineuronal net	Bcan	IDA		Mouse	MGI:MGI:6192419|PMID:22121037
Cellular Component	GO:0072534	perineuronal net	Bcan	IDA		Mouse	MGI:MGI:2677604|PMID:14550776
Cellular Component	GO:0072534	perineuronal net	Bcan	IDA		Rat	PMID:16644727|RGD:9589827
Cellular Component	GO:0098966	perisynaptic extracellular matrix	Bcan	IDA		Rat	PMID:10414531|RGD:13702202
Cellular Component	GO:0098966	perisynaptic extracellular matrix	Bcan	IDA		Rat	PMID:16503162|RGD:13702210
Cellular Component	GO:0045202	synapse	Bcan	IDA		Rat	PMID:7592978|RGD:1298697
Biological Process	GO:0007420	brain development	Bcan	IEP		Rat	PMID:12799382|RGD:14392782
Biological Process	GO:0007160	cell-matrix adhesion	Bcan	IDA		Rat	PMID:11208904|RGD:14392798
Biological Process	GO:0042063	gliogenesis	Bcan	IEP		Rat	PMID:7869103|RGD:14392800
Biological Process	GO:0021766	hippocampus development	Bcan	IMP	MGI:MGI:2388924	Mouse	PMID:12370289
Biological Process	GO:1990138	neuron projection extension	Bcan	IDA		Rat	PMID:11208904|RGD:14392798
Biological Process	GO:0048168	regulation of neuronal synaptic plasticity	Bcan	IEP		Rat	PMID:15935069|RGD:1578390
Biological Process	GO:0060074	synapse maturation	Bcan	IDA		Mouse	PMID:28712654
Biological Process	GO:0060074	synapse maturation	Bcan	IMP		Mouse	PMID:28712654
Biological Process	GO:0060074	synapse maturation	Bcan	IEP		Mouse	PMID:28712654
Biological Process	GO:0060074	synapse maturation	Bcan	IPI		Mouse	PMID:28712654

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern