Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BEST2
  • Mouse genes Best2
  • Rat genes Best2
  • Zfish genes best2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Best2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005254	chloride channel activity	Best2	IDA		Mouse	MGI:MGI:3763293|PMID:16912113
Molecular Function	GO:0005254	chloride channel activity	Best2	IDA		Mouse	PMID:16707793
Molecular Function	GO:0005515	protein binding	BEST2	IPI	UniProtKB:O00155	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BEST2	IPI	UniProtKB:O75841	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BEST2	IPI	UniProtKB:P21964	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BEST2	IPI	UniProtKB:P49447	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BEST2	IPI	UniProtKB:P52803	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BEST2	IPI	UniProtKB:P54315	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BEST2	IPI	UniProtKB:P78369	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BEST2	IPI	UniProtKB:Q13021	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BEST2	IPI	UniProtKB:Q14802-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BEST2	IPI	UniProtKB:Q5BJH2-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BEST2	IPI	UniProtKB:Q6N075	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BEST2	IPI	UniProtKB:Q8N2U9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BEST2	IPI	UniProtKB:Q96AA3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BEST2	IPI	UniProtKB:Q96LL9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BEST2	IPI	UniProtKB:Q9H1C4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BEST2	IPI	UniProtKB:Q9H2L4	Human	PMID:32296183
Cellular Component	GO:0034707	chloride channel complex	Best2	IDA		Mouse	MGI:MGI:3763293|PMID:16912113
Cellular Component	GO:0005929	cilium	Best2	IDA		Mouse	MGI:MGI:3763293|PMID:16912113
Biological Process	GO:1902476	chloride transmembrane transport	Best2	IMP		Mouse	MGI:MGI:3763293|PMID:16912113
Biological Process	GO:0006821	chloride transport	Best2	IDA		Mouse	PMID:16707793
Biological Process	GO:0051899	membrane depolarization	Best2	IDA		Mouse	MGI:MGI:3763293|PMID:16912113
Biological Process	GO:0007608	sensory perception of smell	Best2	IEP		Mouse	MGI:MGI:3763293|PMID:16912113

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern