Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BMERB1
  • Mouse genes Bmerb1
  • Rat genes Bmerb1
  • Zfish genes bmerb1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Bmerb1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	BMERB1	IPI	UniProtKB:Q8WZA2	Human	PMID:24722188
Molecular Function	GO:0005515	protein binding	BMERB1	IPI	UniProtKB:Q8WZA2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	BMERB1	IPI	UniProtKB:Q99081	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	Bmerb1	IPI	MGI:MGI:1277952	Mouse	PMID:11591653
Cellular Component	GO:0015630	microtubule cytoskeleton	Bmerb1	IDA		Mouse	PMID:25099998
Biological Process	GO:0021814	cell motility involved in cerebral cortex radial glia guided migration	Bmerb1	IMP		Mouse	PMID:25099998
Biological Process	GO:0007019	microtubule depolymerization	Bmerb1	IMP		Mouse	PMID:25099998
Biological Process	GO:0021822	negative regulation of cell motility involved in cerebral cortex radial glia guided migration	Bmerb1	IMP		Mouse	PMID:25099998
Biological Process	GO:0007026	negative regulation of microtubule depolymerization	Bmerb1	IMP		Mouse	PMID:25099998
Biological Process	GO:0001966	thigmotaxis	bmerb1	IMP	ZFIN:ZDB-GENO-220615-1	Zfish	PMID:32421859

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern