Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BMF
  • Mouse genes Bmf
  • Rat genes Bmf
  • Zfish genes bmf1,bmf2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Bmf

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:Q9D0M5	Human	PMID:11546872
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:Q04864	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:Q07817	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:Q92843	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:Q96FJ2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:Q9UBB9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:Q9UDX3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:A0A0S2Z3D2	Human	PMID:26871637
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:Q07817	Human	PMID:26871637
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:Q9UBB9	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:P29972	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:P63167	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:P78358	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:P80188	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:Q07817	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:Q07820	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:Q6P9E2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:Q92529	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:Q92843	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:Q9HD36	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:Q9UBB9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:Q9Y4H4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:O14901	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:O60333-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:O76024	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:P04792	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:P28799	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:Q7Z412	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	BMF	IPI	UniProtKB:Q92870-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Bmf	IPI	UniProtKB:P10415|UniProtKB:Q92843	Mouse	MGI:MGI:3694305|PMID:16697956
Molecular Function	GO:0005515	protein binding	Bmf	IPI	UniProtKB:Q07440	Mouse	MGI:MGI:5926046|PMID:18462686
Molecular Function	GO:0005515	protein binding	Bmf	IPI	UniProtKB:P10415|UniProtKB:Q92843	Mouse	MGI:MGI:3689775|PMID:15694340
Molecular Function	GO:0005515	protein binding	Bmf	IPI	PR:P70345	Mouse	PMID:11546872
Molecular Function	GO:0005515	protein binding	Bmf	IPI	PR:Q9D0M5	Mouse	PMID:14561217
Molecular Function	GO:0005515	protein binding	Bmf	IPI	PR:P10417	Mouse	PMID:11546872
Cellular Component	GO:0001669	acrosomal vesicle	Bmf	IDA		Rat	PMID:14668207|RGD:2314008
Cellular Component	GO:0015629	actin cytoskeleton	Bmf	IDA		Mouse	PMID:11546872
Cellular Component	GO:0005737	cytoplasm	Bmf	IDA		Mouse	PMID:11546872
Cellular Component	GO:0016459	myosin complex	Bmf	IDA		Mouse	MGI:MGI:2158578|PMID:11546872
Cellular Component	GO:0016459	myosin complex	Bmf	IPI	UniProtKB:Q9D0M5	Mouse	MGI:MGI:2158578|PMID:11546872
Biological Process	GO:0043276	anoikis	BMF	IDA		Human	PMID:11546872
Biological Process	GO:0009267	cellular response to starvation	Bmf	IMP		Mouse	MGI:MGI:5490676|PMID:23629966
Biological Process	GO:0034644	cellular response to UV	BMF	IDA		Human	PMID:23629966
Biological Process	GO:0034644	cellular response to UV	Bmf	IDA		Mouse	MGI:MGI:5490676|PMID:23629966
Biological Process	GO:2001234	negative regulation of apoptotic signaling pathway	Bmf	IMP		Mouse	PMID:11546872
Biological Process	GO:1904093	negative regulation of autophagic cell death	Bmf	IMP		Mouse	MGI:MGI:5490676|PMID:23629966
Biological Process	GO:0010507	negative regulation of autophagy	BMF	IDA		Human	PMID:23629966
Biological Process	GO:0010507	negative regulation of autophagy	Bmf	IMP		Mouse	MGI:MGI:5490676|PMID:23629966
Biological Process	GO:0043065	positive regulation of apoptotic process	BMF	IMP		Human	PMID:19671867
Biological Process	GO:0043065	positive regulation of apoptotic process	bmf2	IDA		Zfish	PMID:16888233
Biological Process	GO:0043065	positive regulation of apoptotic process	bmf1	IDA		Zfish	PMID:16888646
Biological Process	GO:2001235	positive regulation of apoptotic signaling pathway	Bmf	IDA		Mouse	PMID:11546872
Biological Process	GO:0043280	positive regulation of cysteine-type endopeptidase activity involved in apoptotic process	bmf1	IMP	ZFIN:ZDB-MRPHLNO-070126-3	Zfish	PMID:16888646
Biological Process	GO:0031334	positive regulation of protein-containing complex assembly	Bmf	IDA		Mouse	MGI:MGI:5009775|PMID:21041309
Biological Process	GO:0090200	positive regulation of release of cytochrome c from mitochondria	Bmf	IGI	UniProtKB:P70444	Mouse	MGI:MGI:5009775|PMID:21041309

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern