Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BOP1
  • Mouse genes Bop1
  • Rat genes Bop1
  • Zfish genes bop1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Bop1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	BOP1	IPI	UniProtKB:O00541	Human	PMID:16043514
Molecular Function	GO:0005515	protein binding	BOP1	IPI	UniProtKB:Q9GZL7	Human	PMID:16043514
Molecular Function	GO:0005515	protein binding	BOP1	IPI	UniProtKB:O00541	Human	PMID:16738141
Molecular Function	GO:0005515	protein binding	BOP1	IPI	UniProtKB:Q9GZL7	Human	PMID:16738141
Molecular Function	GO:0005515	protein binding	BOP1	IPI	UniProtKB:O00541	Human	PMID:17353269
Molecular Function	GO:0005515	protein binding	BOP1	IPI	UniProtKB:Q9GZL7	Human	PMID:17353269
Molecular Function	GO:0005515	protein binding	BOP1	IPI	UniProtKB:Q96GQ7	Human	PMID:25825154
Molecular Function	GO:0005515	protein binding	BOP1	IPI	UniProtKB:O00541	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	Bop1	IPI	UniProtKB:O00541|UniProtKB:Q9GZL7	Mouse	MGI:MGI:3843427|PMID:17353269
Molecular Function	GO:0005515	protein binding	Bop1	IPI	PR:Q9EQ61	Mouse	PMID:15225545
Molecular Function	GO:0043021	ribonucleoprotein complex binding	Bop1	IDA		Mouse	PMID:10891491
Molecular Function	GO:0003723	RNA binding	BOP1	HDA		Human	PMID:22658674
Cellular Component	GO:0005694	chromosome	BOP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	BOP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	Bop1	IDA		Mouse	MGI:MGI:3843427|PMID:17353269
Cellular Component	GO:0005654	nucleoplasm	BOP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0070545	PeBoW complex	BOP1	IDA		Human	PMID:16043514
Cellular Component	GO:0070545	PeBoW complex	BOP1	IDA		Human	PMID:16738141
Cellular Component	GO:0070545	PeBoW complex	BOP1	IDA		Human	PMID:17353269
Cellular Component	GO:1990904	ribonucleoprotein complex	BOP1	IDA		Human	PMID:18809582
Biological Process	GO:0008283	cell population proliferation	Bop1	IMP		Mouse	MGI:MGI:3843427|PMID:17353269
Biological Process	GO:0000448	cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	Bop1	IMP		Mouse	MGI:MGI:3843427|PMID:17353269
Biological Process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	BOP1	IMP		Human	PMID:17353269
Biological Process	GO:0051726	regulation of cell cycle	BOP1	IMP		Human	PMID:16043514
Biological Process	GO:1901796	regulation of signal transduction by p53 class mediator	BOP1	IMP		Human	PMID:24120868
Biological Process	GO:0000027	ribosomal large subunit assembly	BOP1	IMP		Human	PMID:24120868
Biological Process	GO:0042273	ribosomal large subunit biogenesis	Bop1	IMP		Mouse	PMID:10891491
Biological Process	GO:0006364	rRNA processing	Bop1	IMP		Mouse	PMID:10891491
Biological Process	GO:0006364	rRNA processing	Bop1	IGI	MGI:MGI:1890613	Mouse	PMID:15225545

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern